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DESCRIPTION
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DESCRIPTION
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Package: synaptome.db
Type: Package
Title: Synamptosome Proteome Database
Version: 0.99.13
Date: 2021-09-25
Authors@R: c(
person("Anatoly", "Sorokin",
email="lptolik@gmail.com", role="aut"),
person("Oksana", "Sorokina",
email="oksana.sorokina@ed.ac.uk", role=c("aut", "cre")),
person("J. Douglas", "Armstrong", role = "aut") )
Description: The package contains local copy of the Synaptic proteome
database. On top of this it provide a set of utility R functions
to query and analyse its content. It allows extraction of information
for specific genes and building the protein-protein interaction graph
for gene sets, synaptic compartments, and brain regions.
Depends: R (>= 3.5.0), synaptome.data
Imports: DBI, RSQLite, dplyr, dbplyr, igraph, Rdpack, AnnotationHub,
BioNAR (>= 1.3.7), utils
RdMacros: Rdpack
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 7.2.3
VignetteBuilder: knitr
BugReports: https://github.com/lptolik/synaptome.db/issues/
biocViews: CustomDBSchema, AnnotationHub, FunctionalAnnotation, AnnotationData
Suggests:
rmarkdown, knitr, pander, testthat, devtools, markdown,
ggplot2