Implement a wrapper to run jug with gridmap

[andsor]

A light-weight wrapper to run jug with gridmap on a Grid Engine cluster

Get the best of both worlds of gridmap and jug

• http://pythonhosted.org/Jug/
• http://gridmap.readthedocs.org/en/latest/

This implements jug.grid_jug to run jug jobs with all the comfortable features of gridmap.

As I am not sure whether this belongs into the gridmap or the jug package, I create a pull request for both to foster discussion between the two projects.
The file jug/grid.py is identical with the file gridmap/jug.py .

[andsor]

Simultaneous PR: pygridtools/gridmap#58

[luispedro]

Thanks for this.

I think this could be a good idea (although I hadn't heard of gridmap until now). I would just like to see a bit more documentation (for myself) before I can accept the pull request.

(There is a minor travis failure, which also needs to be fixed, but I think that one should be a trivial Python2-vs-Python3 thing)

[andsor]

Check, I am on it now

[andsor]

Rebased on top of current master

[andsor]

Fixed Travis

[andsor]

Ola, thanks for considering this!

[andsor]

I'm sorry it seems I cannot get it to work within the jug package on a cluster due to unpickling error (relative imports). I better move this into a small addon package.

[andsor]

Ok I put into this repository https://github.com/andsor/gridjug and got it up and running on the cluster. Closing this now.

[luispedro]

I suggest you announce your gridjug project at https://groups.google.com/group/jug-users/

It's a small group, but it'll get archived.