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setup.py
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setup.py
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import io
import os
from setuptools import setup, find_packages
# Package meta-data.
NAME = 'bacdiving'
DESCRIPTION = 'Bacdiving accesses the Bacterial Diversity Metadatabase BacDive and provides various visualization options.'
URL = 'https://github.com/mBiocoder/Bacdiving'
EMAIL = 'M.Arunkumar@campus.lmu.de'
AUTHOR = 'Mahima Arunkumar'
REQUIRES_PYTHON = '>=3.8.0'
VERSION = "1.2.7"
# What packages are required for this module to be executed?
REQUIRED = [
'alive_progress>=2.4.1',
'anytree>=2.8.0',
'bacdive>=0.2',
'bokeh>=2.4.3',
'ete3>=3.1.2',
'matplotlib==3.6.0',
'numpy>=1.23.0',
'pandas>=1.5.0',
'seaborn',
'setuptools>=65.5.0',
'scikit-learn',
'scipy>=1.9.2',
'toyplot>=1.0.3',
'toytree>=2.0.1',
'wheel>=0.34.1',
'worldmap>=0.1.6']
# What packages are optional?
EXTRAS = {
"docs": [
"sphinx",
"sphinx_rtd_theme",
],
}
long_description = 'README.md'
# Where the magic happens:
setup(
name=NAME,
version=VERSION,
description=DESCRIPTION,
long_description=long_description,
long_description_content_type='text/markdown',
author=AUTHOR,
author_email=EMAIL,
python_requires=REQUIRES_PYTHON,
url=URL,
install_requires=REQUIRED,
include_package_data=True,
license='MIT',
keywords=["BacDive", "bacteria", "phenotype information"]
)