/
NAMESPACE
63 lines (62 loc) · 1.5 KB
/
NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(CNPlot_events)
export(CNconvert)
export(calculateSumOfPosteriors)
export(extractCopynumberFeatures)
export(generateSampleByComponentMatrix)
export(getBinsStartsEnds)
export(getCINProfiles)
export(getCINSamp)
export(getCN)
export(getCNbins)
export(getCNbins.bin)
export(getCNbins.sample)
export(getCentromereDistCounts)
export(getChangepointCN)
export(getClusterSamples)
export(getDifference)
export(getInputmatrix)
export(getNewSegments)
export(getOscilation)
export(getPloidy)
export(getProfiles)
export(getSampNames)
export(getSegRounded)
export(getSegTable)
export(getSegsize)
export(getSimilarities)
export(getSimilarities.sample)
export(getTopHit)
export(getUnifiedCN)
export(lower_norm)
export(normaliseMatrix)
export(pair_cosine)
export(pair_euclidean)
export(pair_manhattan)
export(pair_pearson)
export(plotClusters)
export(plot_diffdensity)
export(plot_simdensity)
export(quantifySignatures)
export(unifySegments)
import(foreach)
import(ggplot2)
importFrom(data.table,as.data.table)
importFrom(data.table,foverlaps)
importFrom(data.table,setkey)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,hist)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,plot.new)
importFrom(graphics,plot.window)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(methods,is)
importFrom(stats,cor)
importFrom(stats,median)
importFrom(stats,var)
importFrom(stats,weighted.mean)
importFrom(tibble,tibble)