/
Portfile
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Portfile
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# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
PortSystem 1.0
PortGroup github 1.0
PortGroup cmake 1.1
github.setup Cibiv IQ-TREE 1.6.12 v
github.tarball_from archive
name iqtree
revision 0
categories science
platforms darwin
license GPL-2
maintainers nomaintainer
description Efficient phylogenomic software by maximum likelihood
long_description The IQ-TREE software was created as the successor of IQPNNI and \
TREE-PUZZLE (thus the name IQ-TREE). IQ-TREE was motivated by the \
rapid accumulation of phylogenomic data, leading to a need for \
efficient phylogenomic software that can handle a large amount of \
data and provide more complex models of sequence evolution. To this \
end, IQ-TREE can utilize multicore computers and distributed parallel \
computing to speed up the analysis. IQ-TREE automatically performs \
checkpointing to resume an interrupted analysis.
homepage http://www.iqtree.org/
checksums rmd160 249414b567bc4f3d2a939d8f7e71cd72f653ed3c \
sha256 9614092de7a157de82c9cc402b19cc8bfa0cb0ffc93b91817875c2b4bb46a284 \
size 4864641
patchfiles-append patch-CMakeLists.txt.diff
depends_build-append path:share/pkgconfig/eigen3.pc:eigen3 \
port:libomp \
port:zlib
compiler.cxx_standard 2011
compiler.cpath-append ${prefix}/include/libomp
post-destroot {
xinstall -d ${destroot}${prefix}/share/doc/${name}
foreach file {example.nex example.cf models.nex example.phy} {
move ${destroot}${prefix}/${file} ${destroot}${prefix}/share/doc/${name}
}
}
# version 1.x no longer developed
livecheck.type none