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species.py
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species.py
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from enum import Enum
class Species(Enum):
HSA = 'Homo sapiens'
RNO = 'Rattus norvegicus'
CFA = 'Canis familiaris'
SCE = 'Saccharomyces cerevisiae'
SPO = 'Schizosaccharomyces pombe'
DDI = 'Dictyostelium discoideum'
XTR = 'Xenopus tropicalis'
MMU = 'Mus musculus'
CEL = 'Caenorhabditis elegans'
SSC = 'Sus scrofa'
DME = 'Drosophila melanogaster'
GGA = 'Gallus gallus'
PFA = 'Plasmodium falciparum'
DRE = 'Danio rerio'
BTA = 'Bos taurus'
CAE = 'Cercopithecus aethiops'
LMA = 'Leishmania major'
ROT = 'Rotavirus'
FLU = 'Influenza A virus'
HCV = 'Hepatitis C Virus'
HCV_1A = 'Hepatitis C virus subtype 1a'
HCV_2A = 'Hepatitis C virus genotype 2a'
HBV = 'Hepatitis B virus'
HER_1 = 'Human herpesvirus 1'
HER_8 = 'Human herpesvirus 8'
CTR = 'Chlamydia trachomatis'
NME = 'Neisseria meningitidis'
NME_B = 'Neisseria meningitidis serogroup B'
STY = 'Salmonella typhimurium'
STY_E = 'Salmonella enterica'
LMO = 'Listeria monocytogenes'
LMO_VAR = 'Listeria monocytogenes serovar 1/2a'
LMO_TYPE = 'Listeria monocytogenes serotype 1/2a'
ECO = 'Escherichia coli'
XLA = 'Xenopus laevis'
OCU = 'Oryctolagus cuniculus'
CGR = 'Cricetulus griseus'
MGA = 'Meleagris gallopavo'
MCV = 'Molluscum contagiosum virus'
MCV_1 = 'Molluscum contagiosum virus subtype 1'
HCY = 'Human cytomegalovirus'
HIV = 'Human immunodeficiency virus 1'
FCA = 'Felis catus'
AMA = 'Arenicola marina'
CFS = 'Crithidia fasciculata'
PCH = 'Penicillium chrysogenum'
TAE = 'Triticum aestivum'
VRA = 'Vigna radiata'
VRA_1 = 'Vigna radiata var. radiata'
CPH = 'Corynephage beta'
VVI = 'Vaccinia virus'
CVI = 'Cowpox virus'
MVI = 'Measles virus'
LPN = 'Legionella pneumophila'
HGA = 'Human gammaherpesvirus 4'
HAL = 'Human alphaherpesvirus 2'
COV = 'Human SARS coronavirus'
COV_2 = 'Severe acute respiratory syndrome coronavirus 2'
IBR = 'Infectious bronchitis virus'
MTU = 'Mycobacterium tuberculosis'
MTU_H37RV = 'Mycobacterium tuberculosis H37Rv'
CAL = 'Candida albicans'
SAU = 'Staphylococcus aureus'
TGO = 'Toxoplasma gondii'
CSB = 'Chlorocebus sabaeus'
MML = 'Macaca mulatta'
NGO = 'Neisseria gonorrhoeae'
LME = 'Leishmania mexicana'
BAN = 'Bacillus anthracis'
CBO = 'Clostridium botulinum'
CTE = 'Clostridium tetani'
HPV_16 = 'Human papillomavirus type 16'
HPV_9 = 'Alphapapillomavirus 9'
CPE = 'Clostridium perfringens'
CPO = 'Cavia porcellus'
OAR = 'Ovis aries'
HAM = 'Homarus americanus'
RSY = 'Respiratory syncytial virus'
WNI = 'West Nile virus'
TEN = 'Tick-borne encephalitis virus'
DVI = 'Dengue virus'
SIV = 'Sindbis virus'
RVA = 'Rotavirus A'
SEV = 'Sendai virus'