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Request software updates #15
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Thanks for reporting! Can you provide a graph where I can debug the issue? |
Thanks @glennhickey! |
Panacus runs smoothly on these graphs (see attached files). @Xuelei-Dai could you describe the specific issue in more detail and provide a graph that does not work with the current release of panacus? yeast-v2.6.4.histgrowth.all.html.gz |
Thanks @danydoerr and @glennhickey! In the current version of Mingraph-Cactus (MC), the gfa file does not have Best, |
That's a good point, @Xuelei-Dai, the current README does not contain an example for the MC graph. I have now added an example for the MC graph. To be perfectly clear, |
Hello Daniel,
I found that the version of the
panacus
is no longer compatible with the results of Mingraph-Cactus (MC), and the final visualized graph is incorrect. I think this problem needs to be completely solved. It is necessary to use the current Mingraph-Cactus pipeline to construct the pan-genome and use the final results for visualization.Best wishes
Xuelei
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