Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

A problem while running panacus-visualize #17

Closed
syresbr opened this issue Jan 24, 2024 · 1 comment
Closed

A problem while running panacus-visualize #17

syresbr opened this issue Jan 24, 2024 · 1 comment

Comments

@syresbr
Copy link

syresbr commented Jan 24, 2024

I was trying to run panacus-visualize with my data but it gave me this error
Traceback (most recent call last): File "/home/gustavo/panacus-0.2.3_linux_x86_64/bin/panacus-visualize", line 16, in <module> from matplotlib.transforms import Bbox ModuleNotFoundError: No module named 'matplotlib'

and in the file is this code from matplotlib.transforms import Bbox
And I tried to run it with your example and it got the same error.

Thanks for your time.

@danydoerr
Copy link
Member

Thanks for reporting, Gustavo!

I assume you downloaded the binary release. If you install panacus with conda, all required python packages are installed, too. In case of the binary, python dependencies are not resolved -- you must handle these yourself. You can find the list of dependencies in the README (https://github.com/marschall-lab/panacus)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants