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Running mdacli with current development version of MDAnalysis the parse_docs is able to parse the docs. I pinned down the problematic entry to the universe attribute of DistanceMatrix in the diffusionmap.py. It can be easily seen by adding a print
Most likely our regex is not able to parse the `... @joaomcteixeira do you have an idea?
Additionally it seems that MDAnalysis also got docstring entries using : and : to seperate the name and the type. I think we are not able to parse them...
The text was updated successfully, but these errors were encountered:
Running mdacli with current development version of MDAnalysis the
parse_docs
is able to parse the docs. I pinned down the problematic entry to the universe attribute of DistanceMatrix in the diffusionmap.py. It can be easily seen by adding a printstatement to before line L288
https://github.com/PicoCentauri/mda_cli/blob/ad619df0f7ab3473ab4c2e8789954c5c78ff0b9e/src/mdacli/cli.py#L281-L288
Most likely our regex is not able to parse the `... @joaomcteixeira do you have an idea?
Additionally it seems that MDAnalysis also got docstring entries using
:
and:
to seperate the name and the type. I think we are not able to parse them...The text was updated successfully, but these errors were encountered: