Error running docker compose up using the branch blaze_update

[RaffaelBild]

Hello,

unfortunately, I'm getting an error when I try to run the command docker compose up using the branch blaze_update in the folder step2. The output I get is as follows:

step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: pthread_create failed for thread 1 of 4: Operation not permitted
step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: RLIMIT_NPROC -1 current, -1 max
step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: pthread_create failed for thread 2 of 4: Operation not permitted
step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: RLIMIT_NPROC -1 current, -1 max
step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: pthread_create failed for thread 3 of 4: Operation not permitted
step2-projectathon6-miracum1-step2-1 | OpenBLAS blas_thread_init: RLIMIT_NPROC -1 current, -1 max
step2-projectathon6-miracum1-step2-1 | During startup - Warning messages:
step2-projectathon6-miracum1-step2-1 | 1: package ‘utils’ in options("defaultPackages") was not found
step2-projectathon6-miracum1-step2-1 | 2: package ‘stats’ in options("defaultPackages") was not found
step2-projectathon6-miracum1-step2-1 | Error: .onLoad failed in loadNamespace() for 'utils', details:
step2-projectathon6-miracum1-step2-1 | call: system(paste(which, shQuote(names[i])), intern = TRUE, ignore.stderr = TRUE)
step2-projectathon6-miracum1-step2-1 | error: cannot popen '/usr/bin/which 'uname' 2>/dev/null', probable reason 'Cannot allocate memory'
step2-projectathon6-miracum1-step2-1 | Execution halted
step2-projectathon6-miracum1-step2-1 exited with code 1

The OS of the machine used is Ubuntu 20.04.5 LTS and the version of Docker is 20.10.7, build f0df350

Any help would be greatly appreciated

[mematt]

Hi,

1. is there a way to just update to a newer docker version?
   Searching for "docker compose up OpenBLAS blas_thread_init: pthread_create failed for thread 1 of 4: Operation not permitted" gave these two somewhat similar problems.

• Unable to start label studio from latest docker due to OpenBLAS operation not permitted
• One solution hier suggests updating to docker v.20.10.12
• In the docker file, we limit nCPU similarly to 1 thread ## build ARGs ARG NCPUS=${NCPUS:--1}.
• Also, would it be possible to try pulling the docker hub version of the blaze container as described in step1 only changing the git clone path for the blaze branch

2. Additionally, there are some packages which do not seem to install correctly. It might also be an issue with the proxy settings and internet connection.

if needed, we can setup a debugging call for the next week.

[NandhiniS08]

In the error messgae, there is also a memory related issue error: cannot popen '/usr/bin/which 'uname' 2>/dev/null', probable reason 'Cannot allocate memory'
Is it possible to increase the RAM in the server you are executing?

[RaffaelBild]

Thanks for the support!
I have tried this again on a different VM with docker version 20.10.23 installed and it seems this has fixed the problem :)