Pinned

1. nanoranger nanoranger Public

   simplified cellranger for long-read data

   Python 13 3

2. slide-recon slide-recon Public

   Python 1

3. LR_colocalization LR_colocalization Public

   Permutation testing on ligand-receptor coexpression on spatial data

   Python

4. align_unmapped align_unmapped Public

   Quantification of unmapped (viral, microbial) reads obtained from high-throughput barcoded libraries such as 10x Genomics

   Jupyter Notebook 3

5. slide-annotation slide-annotation Public

   Jupyter Notebook

6. EM-CNN EM-CNN Public

   Deep learning pipeline for classification of histopathology images

   Python