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Paralellization, -m, does not work properly in V1.7. #69

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MehmetAzizYirik opened this issue Sep 2, 2021 · 4 comments
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Paralellization, -m, does not work properly in V1.7. #69

MehmetAzizYirik opened this issue Sep 2, 2021 · 4 comments
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@MehmetAzizYirik
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MehmetAzizYirik commented Sep 2, 2021

While writing in SDF in parallel, it returns error. Although it generates isomers correctly, there is an issue while writing to the same SDFWriter file from different threads.

@chaileon
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chaileon commented Sep 3, 2021

Thanks! I just re-cloned your repo, and tried this:
java -jar target/MAYGEN-1.7.jar -f c10OH16 -v -t -o odir/ -sdf -m 4
I am still getting this error:
java.util.concurrent.ExecutionException: java.lang.ArrayIndexOutOfBoundsException

Thanks!
Hai Leong

@MehmetAzizYirik
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@chaileon We are still working on the issue in writing into SDF in multithread mode.

@javadev
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javadev commented Sep 5, 2021

#77

@MehmetAzizYirik MehmetAzizYirik added the bug Something isn't working label Sep 7, 2021
@MehmetAzizYirik
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@chaileon We solved the issue and tested with the new release V.1.8.

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