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DESCRIPTION
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DESCRIPTION
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Package: demultiplexingbioc23
Title: Demultiplexing package demo for Bioc23
Version: 0.99.0
Authors@R:
person(given = "Michael",
family = "Lynch",
role = c("aut", "cre"),
email = "michael.lynch@ul.ie",
comment = c(ORCID = "0000-0001-9535-6461"))
Description: Package for demultiplexing workshop at bioc23.
also gives demuxsnp demo.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Depends:
R (>= 4.3.0)
Imports:
ggpubr,
dittoSeq
Suggests:
Seurat,
SingleCellExperiment,
viridisLite,
ComplexHeatmap,
demuxSNP,
CiteFuse,
EnsDb.Hsapiens.v86,
utils,
knitr,
rmarkdown,
pkgdown,
BiocStyle,
cellhashR,
gridExtra,
kableExtra,
scater,
ggrepel,
scales
Remotes:
michaelplynch/demuxSNP,
bimberlab/cellhashR
URL: https://michaelplynch.github.io/demultiplexing-bioc23/
BugReports: https://github.com/michaelplynch/demultiplexing-bioc23
VignetteBuilder: knitr
DockerImage: ghcr.io/michaelplynch/demultiplexing-bioc23