test_03.py

import os
import unittest
import pandas as pd
import biogeme.database as db
import biogeme.biogeme as bio
from biogeme import models
from biogeme.expressions import Beta

myPath = os.path.dirname(os.path.abspath(__file__))
df = pd.read_csv(f'{myPath}/swissmetro.dat', sep='\t')
database = db.Database('swissmetro', df)

# The Pandas data structure is available as database.data. Use all the
# Pandas functions to invesigate the database
# print(database.data.describe())

globals().update(database.variables)

# Removing some observations can be done directly using pandas.
# remove = (((database.data.PURPOSE != 1) & (database.data.PURPOSE != 3)) | (database.data.CHOICE == 0))
# database.data.drop(database.data[remove].index,inplace=True)

# Here we use the 'biogeme' way for backward compatibility
exclude = ((PURPOSE != 1) * (PURPOSE != 3) + (CHOICE == 0)) > 0
database.remove(exclude)


ASC_CAR = Beta('ASC_CAR', 0, None, None, 0)
ASC_TRAIN = Beta('ASC_TRAIN', 0, None, None, 0)
ASC_SM = Beta('ASC_SM', 0, None, None, 1)
B_TIME = Beta('B_TIME', 0, None, None, 0)
B_COST = Beta('B_COST', 0, None, None, 0)
Scale_group3 = Beta('Scale_group3', 1, 0.001, None, 0)


# Scale
scale = (GROUP == 2) + (GROUP == 3) * Scale_group3

SM_COST = SM_CO * (GA == 0)
TRAIN_COST = TRAIN_CO * (GA == 0)

TRAIN_TT_SCALED = database.DefineVariable('TRAIN_TT_SCALED', TRAIN_TT / 100.0)
TRAIN_COST_SCALED = database.DefineVariable(
    'TRAIN_COST_SCALED', TRAIN_COST / 100
)
SM_TT_SCALED = database.DefineVariable('SM_TT_SCALED', SM_TT / 100.0)
SM_COST_SCALED = database.DefineVariable('SM_COST_SCALED', SM_COST / 100)
CAR_TT_SCALED = database.DefineVariable('CAR_TT_SCALED', CAR_TT / 100)
CAR_CO_SCALED = database.DefineVariable('CAR_CO_SCALED', CAR_CO / 100)

V1 = ASC_TRAIN + B_TIME * TRAIN_TT_SCALED + B_COST * TRAIN_COST_SCALED
V2 = ASC_SM + B_TIME * SM_TT_SCALED + B_COST * SM_COST_SCALED
V3 = ASC_CAR + B_TIME * CAR_TT_SCALED + B_COST * CAR_CO_SCALED

# Associate utility functions with the numbering of alternatives
V = {1: scale * V1, 2: scale * V2, 3: scale * V3}


# Associate the availability conditions with the alternatives
CAR_AV_SP = database.DefineVariable('CAR_AV_SP', CAR_AV * (SP != 0))
TRAIN_AV_SP = database.DefineVariable('TRAIN_AV_SP', TRAIN_AV * (SP != 0))

av = {1: TRAIN_AV_SP, 2: SM_AV, 3: CAR_AV_SP}


class test_03(unittest.TestCase):
    def testEstimation(self):
        logprob = models.loglogit(V, av, CHOICE)
        biogeme = bio.BIOGEME(database, logprob)
        biogeme.saveIterations = False
        biogeme.generateHtml = False
        biogeme.generatePickle = False
        results = biogeme.estimate()
        self.assertAlmostEqual(results.data.logLike, -4976.691, 2)


if __name__ == '__main__':
    unittest.main()