Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[BUG] Cannot import BioSimSpace after installation of biosimspace 2023.1.2 using mamba #421

Closed
cespos opened this issue Feb 24, 2023 · 3 comments
Labels

Comments

@cespos
Copy link

cespos commented Feb 24, 2023

Describe the bug
Hi,

I tried to install BioSimSpace 2023.1.2 following the instructions reported in the biosimspace.openbiosim page:

mamba create -n openbiosim "python<3.10"
mamba install -n openbiosim -c openbiosim biosimspace

The installation completed successfully. However when I tried to import BSS in python I got the following error:
image

To Reproduce
See above

Expected behavior
No error when importing BSS

Input files
None

(please complete the following information):

  • Linux
  • Version of Python: 3.9.16
  • Version of BioSimSpace: 2023.1.2
  • Version of Sire: 2023.1.2
  • I confirm that I have checked this bug still exists in the latest released version of BioSimSpace: yes
@cespos cespos added the bug label Feb 24, 2023
@cespos cespos changed the title [BUG] The installation of biosimspace 2023.1.2 using mamba did not succeed [BUG] Cannot import BioSimSpace after installation of biosimspace 2023.1.2 using mamba Feb 24, 2023
@lohedges
Copy link
Member

Please can use the development label, i.e. -c openbiosim/label/dev. The new convert functionality uses some functionality from Sire that isn't yet in a release. This will be fixed when the next version comes out, which should be soon.

@lohedges
Copy link
Member

This is now reported here.

@cespos
Copy link
Author

cespos commented Feb 27, 2023

It works now, thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

No branches or pull requests

2 participants