Fixes a logic bug in Pyramidal storage #139
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Also lots of cleanup and addition of JavaDoc.
nicost
changed the title
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You found it--Awesome! |
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If you bump the version in the POM this will automatically propagate up to the ivy file in micro-manager |
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Fixes a logic bug encountered in Micro-Magellan. The code in
populateNewResolutionLevel(called when increasing the resolution level), callsaddToLowResStoragewith the row and column index of the previous level rather than the top level (as that code expected before this PR). This would remarkably work most of the time, but there were clearly times this would break. SincepopulateNewResolutionLevelhad no way of knowing the original row and column, I changed the functionsaddToLowResStorageanddownsampleto work with the row and column of the previous level rather than that of the top level image. This fixes the behavior observed in Micro-Magellan.Most (all?) other changes are cosmetic and will help to make this code more maintainable in the future.