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tracking macosx support #31

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jacobrosenthal opened this issue Dec 19, 2017 · 2 comments
Closed

tracking macosx support #31

jacobrosenthal opened this issue Dec 19, 2017 · 2 comments

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@jacobrosenthal
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jacobrosenthal commented Dec 19, 2017 •
edited

Ive been sitting on the sidelines hoping someone would tackle osx support but it hasnt happened yet, so heres my start

Jacobs-Air:~ jacobrosenthal$ gcc --version
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 9.0.0 (clang-900.0.39.2)
Target: x86_64-apple-darwin17.3.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
Jacobs-Air:~ jacobrosenthal$

Yeah were clang masquerading on macosx, need gcc5

brew install gcc5
I already have it

Jacobs-Air:~ jacobrosenthal$ gcc-5 --version
gcc-5 (Homebrew GCC 5.5.0) 5.5.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

ah config.mk already uses with CC=g++-5

try to make

Jacobs-MacBook-Air:EdgeML jacobrosenthal$ make -j
In file included from utils.h:7:0,
                 from utils.cpp:4:
pre_processor.h:7:17: fatal error: mkl.h: No such file or directory

MKL doesnt appear to be in brew yet
was problematic on osx? maybe not now?
https://github.com/Homebrew/homebrew-science/issues/2840
I had to get that manually
https://software.intel.com/en-us/get-started-with-mkl-for-osx

thus in config.mk
MKL_ROOT=/opt/intel/mkl
and $(MKL_ROOT)/lib/intel64 becomes $(MKL_ROOT)/lib
and /opt/intel/mkl/lib/intel64/ becomes /opt/intel/mkl/lib/ everywhere

bunch of this

/opt/intel/mkl/include/mkl_service.h:30:20: fatal error: stdlib.h: No such file or directory

You probably wont need to, but my brewed gcc5 was broken, and I had to
brew remove gcc5 && brew install gcc5

Then in src/common/goldfoil.cpp feenableexcept isnt available
Some stuff about fixing that but ill comment it for now
https://stackoverflow.com/questions/247053/enabling-floating-point-interrupts-on-mac-os-x-intel

Then this I cant figure out, Click to expand ``` /var/folders/hv/syzcx3w10850txk2z6tbnb9m0000gn/T//ccsNs2oT.s:60644:11: note: change section name to "__const" .section __DATA,__const_coal,coalesced ^ ~~~~~~~~~~~~ g++-5 -o ../../libProtoNN.so -shared -fPIC ProtoNNModel.o ProtoNNHyperParams.o ProtoNNParams.o ProtoNNTrainer.o ProtoNNPredictor.o ProtoNNFunctions.o cluster.o -lc Undefined symbols for architecture x86_64: "EdgeML::loadMinMax(Eigen::Matrix&, Eigen::Matrix&, int, std::__cxx11::basic_string, std::allocator >)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::normalize() in ProtoNNPredictor.o "EdgeML::saveMinMax(Eigen::Matrix const&, Eigen::Matrix const&, std::__cxx11::basic_string, std::allocator >)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::normalize() in ProtoNNTrainer.o "EdgeML::l2Normalize(Eigen::SparseMatrix&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::normalize() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::normalize() in ProtoNNPredictor.o "EdgeML::parallelExp(Eigen::Matrix&)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::RBF() in ProtoNNPredictor.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) [clone .constprop.878] in ProtoNNFunctions.o "EdgeML::ResultStruct::scaleAndAdd(EdgeML::ResultStruct&, float)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::testBatchWise() in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::testPointWise() in ProtoNNPredictor.o "EdgeML::ResultStruct::scale(float)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::testBatchWise() in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::testPointWise() in ProtoNNPredictor.o "EdgeML::ResultStruct::ResultStruct()", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::testBatchWise() in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::testPointWise() in ProtoNNPredictor.o "EdgeML::computeMinMax(Eigen::SparseMatrix const&, Eigen::Matrix&, Eigen::Matrix&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::normalize() in ProtoNNTrainer.o "EdgeML::denseExportStat(Eigen::Matrix const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportBDense() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportWDense() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportZDense() in ProtoNNTrainer.o "EdgeML::global_log_info(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)", referenced from: EdgeML::ProtoNN::ProtoNNModel::ProtoNNModel(EdgeML::ProtoNN::ProtoNNModel::ProtoNNHyperParams const&) in ProtoNNModel.o EdgeML::ProtoNN::ProtoNNModel::ProtoNNHyperParams::finalizeHyperParams() in ProtoNNHyperParams.o EdgeML::ProtoNN::ProtoNNModel::ProtoNNHyperParams::setHyperParamsFromArgs(int, char const**) in ProtoNNHyperParams.o EdgeML::ProtoNN::ProtoNNTrainer::createOutputDirs() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::normalize() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::setFromArgs(int, char const**) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::initializeModel() in ProtoNNTrainer.o ... "EdgeML::minMaxNormalize(Eigen::SparseMatrix&, Eigen::Matrix const&, Eigen::Matrix const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::normalize() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::normalize() in ProtoNNPredictor.o "EdgeML::global_log_trace(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)", referenced from: EdgeML::sparsekmeans::kmeanspp(Eigen::SparseMatrix const&, float const*, Eigen::Matrix&) in cluster.o EdgeML::sparsekmeans::kmeans(Eigen::SparseMatrix const&, Eigen::Matrix&, int, unsigned long long*) in cluster.o EdgeML::densekmeans::kmeanspp(Eigen::Matrix const&, float const*, Eigen::Matrix&) in cluster.o EdgeML::densekmeans::kmeans(Eigen::Matrix const&, Eigen::Matrix&, int, unsigned long long*) in cluster.o EdgeML::densekmeans::kmeans(Eigen::Matrix const&, Eigen::Matrix&, int, unsigned long long*) [clone .constprop.414] in cluster.o EdgeML::kmeansLabelwise(Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix&, Eigen::Matrix&, int) in cluster.o "EdgeML::sparseExportStat(Eigen::Matrix const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportBSparse() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportWSparse() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::sizeForExportZSparse() in ProtoNNTrainer.o "EdgeML::exportDenseMatrix(Eigen::Matrix const&, unsigned long const&, char*)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::exportBDense(int, char*) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::exportWDense(int, char*) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::exportZDense(int, char*) in ProtoNNTrainer.o "EdgeML::exportSparseMatrix(Eigen::Matrix const&, unsigned long const&, char*)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::exportBSparse(int, char*) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::exportWSparse(int, char*) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::exportZSparse(int, char*) in ProtoNNTrainer.o "EdgeML::getTopKScoresBatch(Eigen::Matrix const&, Eigen::Matrix&, Eigen::Matrix&, int)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::saveTopKScores(std::__cxx11::basic_string, std::allocator >, int) in ProtoNNPredictor.o "EdgeML::global_log_warning(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::createOutputDirs() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::createOutputDirs() in ProtoNNPredictor.o EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&) in ProtoNNFunctions.o "EdgeML::writeMatrixInASCII(Eigen::Matrix const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::train() in ProtoNNTrainer.o "EdgeML::computeModelSizeInkB(float const&, float const&, float const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&)", referenced from: EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&) in ProtoNNFunctions.o "EdgeML::global_log_diagnostic(Eigen::Matrix const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int)", referenced from: EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) [clone .constprop.878] in ProtoNNFunctions.o EdgeML::gradL_W(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gradL_B(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o "EdgeML::sequentialQuickSelect(float*, unsigned long, unsigned long)", referenced from: EdgeML::hardThrsd(Eigen::Matrix&, float) in ProtoNNFunctions.o EdgeML::medianHeuristic(Eigen::Matrix const&, Eigen::Matrix, float) in ProtoNNFunctions.o "EdgeML::mm(Eigen::Matrix&, Eigen::SparseMatrix const&, CBLAS_TRANSPOSE, Eigen::Matrix const&, CBLAS_TRANSPOSE, float, float, long long, long long)", referenced from: EdgeML::gradL_Z(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, long long, long long) in ProtoNNFunctions.o "EdgeML::mm(Eigen::Matrix&, Eigen::Matrix const&, CBLAS_TRANSPOSE, Eigen::SparseMatrix const&, CBLAS_TRANSPOSE, float, float, long long, long long)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::initializeModel() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::scoreBatch(Eigen::Matrix&, unsigned long long, unsigned long long) in ProtoNNPredictor.o std::_Function_handler const&, long long, long long), EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&)::{lambda(Eigen::Matrix const&, long long, long long)#1}>::_M_invoke(std::_Any_data const&, Eigen::Matrix const&, long long&&, std::_Any_data const&) in ProtoNNFunctions.o EdgeML::gradL_W(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o std::_Function_handler (Eigen::Matrix const&, long long, long long), EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&)::{lambda(Eigen::Matrix const&, long long, long long)#2}>::_M_invoke(std::_Any_data const&, Eigen::Matrix const&, long long&&, std::_Any_data const&) in ProtoNNFunctions.o EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&) in ProtoNNFunctions.o "EdgeML::mm(Eigen::Matrix&, Eigen::Matrix const&, CBLAS_TRANSPOSE, Eigen::Matrix const&, CBLAS_TRANSPOSE, float, float, long long, long long)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::RBF() in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::ProtoNNPredictor(unsigned long, char const*) in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::testDenseDataPoint(float const*, unsigned long long const*, unsigned long long const&, EdgeML::ProblemFormat const&) in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::scoreBatch(Eigen::Matrix&, unsigned long long, unsigned long long) in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::ProtoNNPredictor(int const&, char const**) in ProtoNNPredictor.o EdgeML::accuracy(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, EdgeML::ProblemFormat const&) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o ... "EdgeML::Data::finalizeData()", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::finalizeData() in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::ProtoNNPredictor(int const&, char const**) in ProtoNNPredictor.o "EdgeML::Data::feedDenseData(EdgeML::DenseDataPoint const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::feedDenseData(float const*, unsigned long long const*, unsigned long long const&) in ProtoNNTrainer.o "EdgeML::Data::feedSparseData(EdgeML::SparseDataPoint const&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::feedSparseData(float const*, unsigned long long const*, unsigned long long const&, unsigned long long const*, unsigned long long const&) in ProtoNNTrainer.o "EdgeML::Data::loadDataFromFile(EdgeML::DataFormat, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::ProtoNNTrainer(int const&, char const**) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::ProtoNNPredictor(int const&, char const**) in ProtoNNPredictor.o "EdgeML::Data::Data(EdgeML::DataIngestType, EdgeML::DataFormatParams)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::ProtoNNTrainer(EdgeML::ProtoNN::ProtoNNModel::ProtoNNHyperParams const&) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::ProtoNNTrainer(EdgeML::ProtoNN::ProtoNNModel::ProtoNNHyperParams const&) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNTrainer::ProtoNNTrainer(int const&, char const**) in ProtoNNTrainer.o EdgeML::ProtoNN::ProtoNNPredictor::ProtoNNPredictor(int const&, char const**) in ProtoNNPredictor.o "EdgeML::Timer::nextTime(std::__cxx11::basic_string, std::allocator > const&)", referenced from: EdgeML::hardThrsd(Eigen::Matrix&, float) in ProtoNNFunctions.o EdgeML::accuracy(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, EdgeML::ProblemFormat const&) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) [clone .constprop.878] in ProtoNNFunctions.o EdgeML::gradL_Z(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, long long, long long) in ProtoNNFunctions.o EdgeML::gradL_W(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gradL_B(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o ... "EdgeML::Timer::Timer(std::__cxx11::basic_string, std::allocator >)", referenced from: EdgeML::hardThrsd(Eigen::Matrix&, float) in ProtoNNFunctions.o EdgeML::accuracy(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, EdgeML::ProblemFormat const&) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) [clone .constprop.878] in ProtoNNFunctions.o EdgeML::gradL_Z(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, long long, long long) in ProtoNNFunctions.o EdgeML::batchEvaluate(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float const&, EdgeML::ProblemFormat const&, float*) in ProtoNNFunctions.o EdgeML::gradL_W(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o ... "EdgeML::Timer::~Timer()", referenced from: EdgeML::hardThrsd(Eigen::Matrix&, float) in ProtoNNFunctions.o EdgeML::accuracy(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, EdgeML::ProblemFormat const&) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o EdgeML::gaussianKernel(Eigen::Matrix const&, Eigen::Matrix const&, float, long long, long long) [clone .constprop.878] in ProtoNNFunctions.o EdgeML::gradL_Z(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, long long, long long) in ProtoNNFunctions.o EdgeML::batchEvaluate(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float const&, EdgeML::ProblemFormat const&, float*) in ProtoNNFunctions.o EdgeML::gradL_W(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, float, long long, long long) in ProtoNNFunctions.o ... "EdgeML::FileIO::Data::Data(std::__cxx11::basic_string, std::allocator >, Eigen::Matrix&, Eigen::Matrix&, unsigned long long, unsigned long long, unsigned long long, unsigned long long, unsigned long long, unsigned long long, EdgeML::DataFormat&)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::initializeModel() in ProtoNNTrainer.o "EdgeML::Logger::Logger(std::__cxx11::basic_string, std::allocator >)", referenced from: void EdgeML::accProxSGD >(std::function const&, long long, long long)>, std::function (Eigen::Matrix const&, long long, long long)>, std::function&)>, Eigen::Matrix&, int const&, unsigned long long const&, unsigned long long const&, float&, int const&) in ProtoNNFunctions.o "EdgeML::Logger::~Logger()", referenced from: void EdgeML::accProxSGD >(std::function const&, long long, long long)>, std::function (Eigen::Matrix const&, long long, long long)>, std::function&)>, Eigen::Matrix&, int const&, unsigned long long const&, unsigned long long const&, float&, int const&) in ProtoNNFunctions.o "EdgeML::safeDiv(float const&, float const&)", referenced from: EdgeML::accuracy(Eigen::Matrix const&, Eigen::SparseMatrix const&, Eigen::Matrix const&, EdgeML::ProblemFormat const&) in ProtoNNFunctions.o EdgeML::medianHeuristic(Eigen::Matrix const&, Eigen::Matrix, float) in ProtoNNFunctions.o EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&) in ProtoNNFunctions.o void EdgeML::accProxSGD >(std::function const&, long long, long long)>, std::function (Eigen::Matrix const&, long long, long long)>, std::function&)>, Eigen::Matrix&, int const&, unsigned long long const&, unsigned long long const&, float&, int const&) in ProtoNNFunctions.o "EdgeML::evaluate(Eigen::Matrix const&, Eigen::SparseMatrix const&, EdgeML::ProblemFormat)", referenced from: EdgeML::ProtoNN::ProtoNNPredictor::testBatchWise() in ProtoNNPredictor.o EdgeML::ProtoNN::ProtoNNPredictor::testPointWise() in ProtoNNPredictor.o "EdgeML::randPick(Eigen::Matrix const&, Eigen::Matrix&, unsigned long long)", referenced from: EdgeML::ProtoNN::ProtoNNTrainer::initializeModel() in ProtoNNTrainer.o "EdgeML::maxAbsVal(Eigen::Matrix const&)", referenced from: EdgeML::altMinSGD(EdgeML::Data const&, EdgeML::ProtoNN::ProtoNNModel&, float*, std::__cxx11::basic_string, std::allocator > const&) in ProtoNNFunctions.o "___cilkrts_cilk_for_32", referenced from: EdgeML::densekmeans::updateMinDistSqToCenters(Eigen::Matrix const&, float const*, unsigned long long, float const*, float*, float*) in cluster.o EdgeML::sparsekmeans::kmeans(Eigen::SparseMatrix const&, Eigen::Matrix&, int, unsigned long long*) in cluster.o EdgeML::densekmeans::lloydsIter(Eigen::Matrix const&, float const*, Eigen::Matrix
@harsha-simhadri
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@jacobrosenthal
Sorry for the mess on mac. None of us have a macbook to replicate this; please bear with me while I find one to test.

@jacobrosenthal
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jacobrosenthal commented Jun 11, 2018 •
edited

Im able to use on mac via docker with:

# had to max out all resources to successfully build
FROM ubuntu:16.04

RUN apt-get update && apt-get -y install gcc g++ wget git make cpio && \
  wget -q -O - http://registrationcenter-download.intel.com/akdlm/irc_nas/tec/11544/l_mkl_2017.3.196.tgz | tar -xzf - && \
  cd l_mkl_2017.3.196 && \
  sed -i 's/ACCEPT_EULA=decline/ACCEPT_EULA=accept/g' silent.cfg && \
  ./install.sh -s silent.cfg && \
  cd / && \
  git clone https://github.com/Microsoft/EdgeML.git && \
  cd EdgeML && \
  make -Bj
ENV MKL_PATH=/opt/intel/mkl/lib/intel64_lin
ENV EDGEML_ROOT=/EdgeML
ENV LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$MKL_PATH:$EDGEML_ROOT

and then I make bash scripts for each command at /usr/local/bin/ that bring over working directory

#!/bin/bash
  
docker run -v "$(pwd)":/workspace -w /workspace edgeml:latest /EdgeML/BonsaiPredict "$@"

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