dataset.csv generated by this tool does not have the tags column

[javier-alvarez]

This tool does not add a "tags" column expected by InnerEye-DeepLearning and it generates this eerror:

File "InnerEyePrivate/ML/runner.py", line 50, in
main()
File "InnerEyePrivate/ML/runner.py", line 44, in main
runner.run(project_root=fixed_paths.repository_root_directory(),
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/runner.py", line 457, in run
return runner.run()
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/runner.py", line 220, in run
self.run_in_situ(azure_run_info)
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/runner.py", line 411, in run_in_situ
self.ml_runner.setup(azure_run_info)
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/run_ml.py", line 208, in setup
self.container.setup()
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/lightning_base.py", line 160, in setup
dataset_splits = self.config.get_dataset_splits()
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/innereye-deeplearning/InnerEye/ML/model_config_base.py", line 214, in get_dataset_splits
splits = self.get_model_train_test_dataset_splits(dataset_df)
File "/mnt/batch/tasks/shared/LS_root/jobs/radiomicsnn/azureml/master_1674467245_aec08e9c/wd/azureml/master_1674467245_aec08e9c/InnerEyePrivate/ML/configs/segmentation/Prostate.py", line 23, in get_model_train_test_dataset_splits
test = list(dataset_df[dataset_df.tags.str.contains("ContinuousLearning")].subject.unique())
File "/azureml-envs/azureml_ee6e8ff99c839137094f58bdb42aca60/lib/python3.8/site-packages/pandas/core/generic.py", line 5130, in getattr
return object.getattribute(self, name)
AttributeError: 'DataFrame' object has no attribute 'tags'

[javier-alvarez]

Not a bug