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can't build image on OSX Mojave #1

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paxinos opened this issue Nov 30, 2018 · 4 comments
Closed

can't build image on OSX Mojave #1

paxinos opened this issue Nov 30, 2018 · 4 comments

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@paxinos
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paxinos commented Nov 30, 2018

svn cache (/opt/conda/conda-bld/svn_cache)
Size: 0 B

Total: 0 B
Removing /opt/conda/conda-bld/src_cache
Removing /opt/conda/conda-bld/git_cache
Removing /opt/conda/conda-bld/hg_cache
Removing /opt/conda/conda-bld/svn_cache
Enabling notebook extension jupyter-js-widgets/extension...
- Validating: OK
Node v8.10.0
No other errors were seen in the log.

/opt/conda/bin/npm pack '@jupyter-widgets/jupyterlab-manager@^0.35'
jupyter-widgets-jupyterlab-manager-0.35.0.tgz

Errored, use --debug for full output:
ValueError:
"@jupyter-widgets/jupyterlab-manager@0.35.0" is not compatible with the current JupyterLab
Conflicting Dependencies:
JupyterLab Extension Package

=0.19.1 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/application
=2.2.1 <3.0.0 >=1.1.0 <2.0.0 @jupyterlab/coreutils
=0.19.2 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/notebook
=0.19.1 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/rendermime
=3.2.1 <4.0.0 >=2.0.0 <3.0.0 @jupyterlab/services
The command '/bin/sh -c conda install --quiet --yes 'blas==openblas' 'ipywidgets=7.2' 'pandas=0.22*' 'flask=0.12.2' 'numexpr=2.6*' 'matplotlib=2.1*' 'scipy=1.0*' 'seaborn=0.8*' 'scikit-learn=0.19*' 'scikit-image=0.13*' 'sympy=1.1*' 'cython=0.28*' 'patsy=0.5*' 'statsmodels=0.8*' 'cloudpickle=0.5*' 'dill=0.2*' 'numba=0.38*' 'bokeh=0.12*' 'sqlalchemy=1.2*' 'hdf5=1.10*' 'h5py=2.7*' 'vincent=0.4.' 'beautifulsoup4=4.6.' 'jpype1' 'protobuf=3.*' 'xlrd' && conda remove --quiet --yes --force qt pyqt && conda clean -tipsy && jupyter nbextension enable --py widgetsnbextension --sys-prefix && jupyter labextension install @jupyter-widgets/jupyterlab-manager@^0.35 && jupyter labextension install jupyterlab_bokeh@^0.5.0 && npm cache clean --force && rm -rf $CONDA_DIR/share/jupyter/lab/staging && rm -rf /home/$NB_USER/.cache/yarn && rm -rf /home/$NB_USER/.node-gyp && fix-permissions $CONDA_DIR && fix-permissions /home/$NB_USER' returned a non-zero code: 1

@paxinos
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paxinos commented Dec 1, 2018

Same issue on Ubuntu 16.04.3

Total: 0 B
Removing /opt/conda/conda-bld/src_cache
Removing /opt/conda/conda-bld/git_cache
Removing /opt/conda/conda-bld/hg_cache
Removing /opt/conda/conda-bld/svn_cache
Enabling notebook extension jupyter-js-widgets/extension...
- Validating: OK
Node v8.10.0

/opt/conda/bin/npm pack '@jupyter-widgets/jupyterlab-manager@^0.35'
jupyter-widgets-jupyterlab-manager-0.35.0.tgz

Errored, use --debug for full output:
ValueError:
"@jupyter-widgets/jupyterlab-manager@0.35.0" is not compatible with the current JupyterLab
Conflicting Dependencies:
JupyterLab Extension Package

=0.19.1 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/application
=2.2.1 <3.0.0 >=1.1.0 <2.0.0 @jupyterlab/coreutils
=0.19.2 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/notebook
=0.19.1 <0.20.0 >=0.16.0 <0.17.0 @jupyterlab/rendermime
=3.2.1 <4.0.0 >=2.0.0 <3.0.0 @jupyterlab/services
ERROR: Service 'mtsw' failed to build: The command '/bin/sh -c conda install --quiet --yes 'blas==openblas' 'ipywidgets=7.2' 'pandas=0.22*' 'flask=0.12.2' 'numexpr=2.6*' 'matplotlib=2.1*' 'scipy=1.0*' 'seaborn=0.8*' 'scikit-learn=0.19*' 'scikit-image=0.13*' 'sympy=1.1*' 'cython=0.28*' 'patsy=0.5*' 'statsmodels=0.8*' 'cloudpickle=0.5*' 'dill=0.2*' 'numba=0.38*' 'bokeh=0.12*' 'sqlalchemy=1.2*' 'hdf5=1.10*' 'h5py=2.7*' 'vincent=0.4.' 'beautifulsoup4=4.6.' 'jpype1' 'protobuf=3.*' 'xlrd' && conda remove --quiet --yes --force qt pyqt && conda clean -tipsy && jupyter nbextension enable --py widgetsnbextension --sys-prefix && jupyter labextension install @jupyter-widgets/jupyterlab-manager@^0.35 && jupyter labextension install jupyterlab_bokeh@^0.5.0 && npm cache clean --force && rm -rf $CONDA_DIR/share/jupyter/lab/staging && rm -rf /home/$NB_USER/.cache/yarn && rm -rf /home/$NB_USER/.node-gyp && fix-permissions $CONDA_DIR && fix-permissions /home/$NB_USER' returned a non-zero code: 1

@mervesarac
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Same issue on MacOS Mojave 10.14.2

@mikhailklassen
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Owner

Thanks for alerting me to this. I've updated the Dockerfile and fixed the dependencies that were causing this issue. The image should now build.

I've also made updates to the ReadMe file and pushed a compiled Docker image to Docker Hub, if people wish to just download a prebuilt image.

@mikhailklassen
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Owner

I'm going to close this issue for now, but don't hesitate to reopen it if the error persists.

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