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DESCRIPTION
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DESCRIPTION
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Package: ReductionWrappers
Title: Wrapper exposing several Python dimensional reduction tools
Version: 2.5.4
Authors@R:
person(given = "Miles",
family = "Smith",
role = c("aut", "cre"),
email = "miles-smith@omrf.org")
Description: An R wrapper connecting Python dimensionality reduction and clustering tools,
including openTSNE, opt-SNE, UMAP, PAGA, PHATE, and Phenograph, to R single cell data objects,
such as those from Seurat 2/3 or scater.
Url: https://github.com/milescsmith/ReductionWrappers
BugReports: https://github.com/milescsmith/ReductionWrappers/issues
Depends: R (>= 3.5.0)
Imports:
rlang,
reticulate,
parallel,
ggplot2,
ggpubr,
glue,
magrittr,
Matrix,
Seurat,
SingleCellExperiment,
SummarizedExperiment,
s2a
Remotes:
bioc::SummarizedExperiment,
bioc::SingleCellExperiment,
github::milescsmith/s2a
License: BSD_3_clause + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1