-
Notifications
You must be signed in to change notification settings - Fork 11
/
NAMESPACE
45 lines (44 loc) · 1.29 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
# Generated by roxygen2: do not edit by hand
S3method(GatherData,Seurat)
S3method(GatherData,SingleCellExperiment)
export("%>%")
export(plotModules)
export(scWGCNA)
import(patchwork)
importFrom(Seurat,GetAssayData)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assays)
importFrom(WGCNA,TOMplot)
importFrom(WGCNA,TOMsimilarity)
importFrom(WGCNA,TOMsimilarityFromExpr)
importFrom(WGCNA,adjacency)
importFrom(WGCNA,allowWGCNAThreads)
importFrom(WGCNA,bicor)
importFrom(WGCNA,goodSamplesGenes)
importFrom(WGCNA,labels2colors)
importFrom(WGCNA,mergeCloseModules)
importFrom(WGCNA,moduleEigengenes)
importFrom(WGCNA,pickSoftThreshold)
importFrom(WGCNA,plotDendroAndColors)
importFrom(cowplot,plot_grid)
importFrom(dplyr,filter)
importFrom(dplyr,na_if)
importFrom(dynamicTreeCut,cutreeDynamic)
importFrom(flashClust,flashClust)
importFrom(flashClust,hclust)
importFrom(ggplot2,aes)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,theme)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(glue,glue)
importFrom(gridExtra,grid.arrange)
importFrom(magrittr,"%>%")
importFrom(purrr,"%||%")
importFrom(purrr,reduce)
importFrom(seuratBubblePlot,bubbleplot)
importFrom(stats,as.dist)
importFrom(stringr,str_remove)