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Getting Error in "ASSEMBLING MT GENOMES WITH ASSEMBLEMTGENOME..." step #106

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Nirmal2310 opened this issue Dec 30, 2021 · 1 comment
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@Nirmal2310
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Hi @clody23 @domenico-simone @ma-diroma @robertopreste, I am using MToolBox for assembling human mitochondrial genome with simulated reads as input. I am getting an error in the assembling part of the pipeline and I am attaching the configuration file as well as the log file of the run here.
I request you to please suggest what is wrong with my pipeline and how can I resolve it. I will be very thankful to you all.
MToolBox error
My code:
MToolBox.sh -i sim_hiseq_exponential.conf -a "-t 16" -m "-t 16"
Config file:
sim_hiseq_exponential.conf.txt
The total reads are 250K per fastq file.
Please tell me if you need anything else from my side.
Thank you very much.

@clody23
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clody23 commented Apr 1, 2022

This issue has been closed:

#108

@clody23 clody23 closed this as completed Apr 1, 2022
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