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Is there any tutorial on segmentation pipeline besides the usage of GUI #133

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zakizhou opened this issue Apr 8, 2017 · 1 comment
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@zakizhou
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zakizhou commented Apr 8, 2017

Thanks @mjirik for such a good package.
I am processing medical images from hundreds of patients, GUI is great for a single patient but is not suitable for this task, is there any tutorial about segmengtation in a python script?

@mjirik
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mjirik commented Apr 9, 2017

Lisa can be used from without GUI. There is no tutorial. Our unit test can be used as an example.
https://github.com/mjirik/lisa/blob/master/tests/liver_segmentation_test.py

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