Code for the paper Two-sample inference for high-dimensional Markov networks by Byol Kim, Song Liu, and Mladen Kolar. arXiv: 1905.00466
The code has been tested with Julia 1.5.4.
Install Julia for your platform: https://julialang.org/downloads/.
You can obtain KLIEPInference using Julia's Pkg REPL-mode (hitting ]
as the first character of the command prompt):
(@v1.5) pkg> add https://github.com/mlakolar/KLIEPInference.jl
You will also need to install the following software.
- JLD, Distributions, ProximalBase, CoordinateDescent, StatsBase, PyPlot, IJulia, Revise.
using Pkg; Pkg.add.(["JLD", "Distributions", "ProximalBase", "CoordinateDescent", "StatsBase", "PyPlot", "IJulia", "Revise"])
- GNU Parallel.
You can install this package using sudo apt install parallel
.
- Jupyter Notebook.
To install Jupyter Notebook, follow instructions here.
Please read "README" at each experiment folder.