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db.go
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db.go
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// Package db provides a database storage layer.
package db
import (
"bytes"
"context"
"crypto/sha256"
"database/sql"
"encoding/hex"
"encoding/json"
"fmt"
"strconv"
"strings"
"github.com/google/uuid"
"go.uber.org/zap"
"github.com/mmcloughlin/goperf/app/db/internal/db"
"github.com/mmcloughlin/goperf/app/entity"
"github.com/mmcloughlin/goperf/app/trace"
"github.com/mmcloughlin/goperf/internal/errutil"
)
//go:generate rm -rf internal/db
//go:generate sqlc generate
// DB provides database access.
type DB struct {
db *sql.DB
q *db.Queries
log *zap.Logger
}
// New builds a database layer backed by the given postgres connection.
func New(ctx context.Context, d *sql.DB) (*DB, error) {
q, err := db.Prepare(ctx, d)
if err != nil {
return nil, err
}
return &DB{
db: d,
q: q,
log: zap.NewNop(),
}, nil
}
// Open postgres database connection with the given connection string.
func Open(ctx context.Context, conn string) (*DB, error) {
d, err := sql.Open("postgres", conn)
if err != nil {
return nil, err
}
return New(ctx, d)
}
// Close database connection.
func (d *DB) Close() error {
return d.db.Close()
}
// SetLogger configures a logger.
func (d *DB) SetLogger(l *zap.Logger) { d.log = l.Named("db") }
// tx executes the given function in a transaction.
func (d *DB) tx(ctx context.Context, fn func(*sql.Tx) error) (err error) {
tx, err := d.db.BeginTx(ctx, nil)
if err != nil {
return err
}
defer func() {
switch p := recover(); {
case p != nil:
if err := tx.Rollback(); err != nil {
d.log.Error("transaction rollback error", zap.Error(err))
}
panic(p)
case err != nil:
if err := tx.Rollback(); err != nil {
d.log.Error("transaction rollback error", zap.Error(err))
}
default:
err = tx.Commit()
}
}()
return fn(tx)
}
// txq executes the given query function in a transaction.
func (d *DB) txq(ctx context.Context, fn func(q *db.Queries) error) error {
return d.tx(ctx, func(tx *sql.Tx) error { return fn(d.q.WithTx(tx)) })
}
// insert executes a batch insert.
func (d *DB) insert(ctx context.Context, tx *sql.Tx, table string, fields []string, values []interface{}) error {
n := len(values)
if n%len(fields) != 0 {
return errutil.AssertionFailure("number of values must be a multiple of the number of fields")
}
// Build query.
buf := bytes.NewBuffer(nil)
fmt.Fprintf(buf, "INSERT INTO %s (%s) VALUES", table, strings.Join(fields, ","))
sep := byte(' ')
for i := 0; i < n; i += len(fields) {
buf.WriteByte(sep)
sep = '('
for j := 0; j < len(fields); j++ {
buf.WriteByte(sep)
sep = ','
buf.WriteByte('$')
buf.WriteString(strconv.Itoa(i + j + 1))
}
buf.WriteByte(')')
sep = ','
}
buf.WriteString(" ON CONFLICT DO NOTHING")
q := buf.String()
// Execute.
_, err := tx.ExecContext(ctx, q, values...)
return err
}
// StoreModule writes module to the database.
func (d *DB) StoreModule(ctx context.Context, m *entity.Module) error {
return d.txq(ctx, func(q *db.Queries) error {
return storeModule(ctx, q, m)
})
}
func storeModule(ctx context.Context, q *db.Queries, m *entity.Module) error {
return q.InsertModule(ctx, db.InsertModuleParams{
UUID: m.UUID(),
Path: m.Path,
Version: m.Version,
})
}
// FindModuleByUUID looks up the given module in the database.
func (d *DB) FindModuleByUUID(ctx context.Context, id uuid.UUID) (*entity.Module, error) {
var m *entity.Module
err := d.txq(ctx, func(q *db.Queries) error {
var err error
m, err = findModuleByUUID(ctx, q, id)
return err
})
return m, err
}
func findModuleByUUID(ctx context.Context, q *db.Queries, id uuid.UUID) (*entity.Module, error) {
m, err := q.Module(ctx, id)
if err != nil {
return nil, err
}
return mapModule(m), nil
}
// ListModules returns all modules.
func (d *DB) ListModules(ctx context.Context) ([]*entity.Module, error) {
var ms []*entity.Module
err := d.txq(ctx, func(q *db.Queries) error {
var err error
ms, err = listModules(ctx, q)
return err
})
return ms, err
}
func listModules(ctx context.Context, q *db.Queries) ([]*entity.Module, error) {
ms, err := q.Modules(ctx)
if err != nil {
return nil, err
}
output := make([]*entity.Module, len(ms))
for i, m := range ms {
output[i] = mapModule(m)
}
return output, nil
}
func mapModule(m db.Module) *entity.Module {
return &entity.Module{
Path: m.Path,
Version: m.Version,
}
}
// StorePackage writes package to the database.
func (d *DB) StorePackage(ctx context.Context, p *entity.Package) error {
return d.txq(ctx, func(q *db.Queries) error {
return storePackage(ctx, q, p)
})
}
func storePackage(ctx context.Context, q *db.Queries, p *entity.Package) error {
if err := storeModule(ctx, q, p.Module); err != nil {
return err
}
return q.InsertPkg(ctx, db.InsertPkgParams{
UUID: p.UUID(),
ModuleUUID: p.Module.UUID(),
RelativePath: p.RelativePath,
})
}
// FindPackageByUUID looks up the given package in the database.
func (d *DB) FindPackageByUUID(ctx context.Context, id uuid.UUID) (*entity.Package, error) {
var p *entity.Package
err := d.txq(ctx, func(q *db.Queries) error {
var err error
p, err = findPackageByUUID(ctx, q, id)
return err
})
return p, err
}
func findPackageByUUID(ctx context.Context, q *db.Queries, id uuid.UUID) (*entity.Package, error) {
p, err := q.Pkg(ctx, id)
if err != nil {
return nil, err
}
m, err := findModuleByUUID(ctx, q, p.ModuleUUID)
if err != nil {
return nil, err
}
return mapPackage(p, m), nil
}
// ListModulePackages returns all packages in the given module.
func (d *DB) ListModulePackages(ctx context.Context, m *entity.Module) ([]*entity.Package, error) {
var ps []*entity.Package
err := d.txq(ctx, func(q *db.Queries) error {
var err error
ps, err = listModulePackages(ctx, q, m)
return err
})
return ps, err
}
func listModulePackages(ctx context.Context, q *db.Queries, m *entity.Module) ([]*entity.Package, error) {
ps, err := q.ModulePkgs(ctx, m.UUID())
if err != nil {
return nil, err
}
output := make([]*entity.Package, len(ps))
for i, p := range ps {
output[i] = mapPackage(p, m)
}
return output, nil
}
func mapPackage(p db.Package, m *entity.Module) *entity.Package {
return &entity.Package{
Module: m,
RelativePath: p.RelativePath,
}
}
// StoreBenchmark writes benchmark to the database.
func (d *DB) StoreBenchmark(ctx context.Context, b *entity.Benchmark) error {
return d.txq(ctx, func(q *db.Queries) error {
return storeBenchmark(ctx, q, b)
})
}
func storeBenchmark(ctx context.Context, q *db.Queries, b *entity.Benchmark) error {
if err := storePackage(ctx, q, b.Package); err != nil {
return err
}
paramsjson, err := json.Marshal(b.Parameters)
if err != nil {
return fmt.Errorf("encode parameters: %w", err)
}
return q.InsertBenchmark(ctx, db.InsertBenchmarkParams{
UUID: b.UUID(),
PackageUUID: b.Package.UUID(),
FullName: b.FullName,
Name: b.Name,
Unit: b.Unit,
Parameters: paramsjson,
})
}
// FindBenchmarkByUUID looks up the given benchmark in the database.
func (d *DB) FindBenchmarkByUUID(ctx context.Context, id uuid.UUID) (*entity.Benchmark, error) {
var b *entity.Benchmark
err := d.txq(ctx, func(q *db.Queries) error {
var err error
b, err = findBenchmarkByUUID(ctx, q, id)
return err
})
return b, err
}
func findBenchmarkByUUID(ctx context.Context, q *db.Queries, id uuid.UUID) (*entity.Benchmark, error) {
b, err := q.Benchmark(ctx, id)
if err != nil {
return nil, err
}
p, err := findPackageByUUID(ctx, q, b.PackageUUID)
if err != nil {
return nil, err
}
return mapBenchmark(b, p)
}
// ListPackageBenchmarks returns all benchmarks in the given package.
func (d *DB) ListPackageBenchmarks(ctx context.Context, p *entity.Package) ([]*entity.Benchmark, error) {
var bs []*entity.Benchmark
err := d.txq(ctx, func(q *db.Queries) error {
var err error
bs, err = listPackageBenchmarks(ctx, q, p)
return err
})
return bs, err
}
func listPackageBenchmarks(ctx context.Context, q *db.Queries, p *entity.Package) ([]*entity.Benchmark, error) {
bs, err := q.PackageBenchmarks(ctx, p.UUID())
if err != nil {
return nil, err
}
output := make([]*entity.Benchmark, len(bs))
for i, b := range bs {
output[i], err = mapBenchmark(b, p)
if err != nil {
return nil, err
}
}
return output, nil
}
func mapBenchmark(b db.Benchmark, p *entity.Package) (*entity.Benchmark, error) {
params := map[string]string{}
if err := json.Unmarshal(b.Parameters, ¶ms); err != nil {
return nil, fmt.Errorf("decode parameters: %w", err)
}
return &entity.Benchmark{
Package: p,
FullName: b.FullName,
Name: b.Name,
Unit: b.Unit,
Parameters: params,
}, nil
}
// StoreDataFile writes the data file to the database.
func (d *DB) StoreDataFile(ctx context.Context, f *entity.DataFile) error {
return d.txq(ctx, func(q *db.Queries) error {
return storeDataFile(ctx, q, f)
})
}
func storeDataFile(ctx context.Context, q *db.Queries, f *entity.DataFile) error {
return q.InsertDataFile(ctx, db.InsertDataFileParams{
UUID: f.UUID(),
Name: f.Name,
SHA256: f.SHA256[:],
})
}
// FindDataFileByUUID looks up the given data file in the database.
func (d *DB) FindDataFileByUUID(ctx context.Context, id uuid.UUID) (*entity.DataFile, error) {
var f *entity.DataFile
err := d.txq(ctx, func(q *db.Queries) error {
var err error
f, err = findDataFileByUUID(ctx, q, id)
return err
})
return f, err
}
func findDataFileByUUID(ctx context.Context, q *db.Queries, id uuid.UUID) (*entity.DataFile, error) {
f, err := q.DataFile(ctx, id)
if err != nil {
return nil, err
}
var hash [sha256.Size]byte
copy(hash[:], f.SHA256)
return &entity.DataFile{
Name: f.Name,
SHA256: hash,
}, nil
}
// StoreProperties writes properties to the database.
func (d *DB) StoreProperties(ctx context.Context, p entity.Properties) error {
return d.txq(ctx, func(q *db.Queries) error {
return storeProperties(ctx, q, p)
})
}
func storeProperties(ctx context.Context, q *db.Queries, p entity.Properties) error {
propertiesjson, err := json.Marshal(p)
if err != nil {
return fmt.Errorf("encode properties: %w", err)
}
return q.InsertProperties(ctx, db.InsertPropertiesParams{
UUID: p.UUID(),
Fields: propertiesjson,
})
}
// FindPropertiesByUUID looks up the given properties in the database.
func (d *DB) FindPropertiesByUUID(ctx context.Context, id uuid.UUID) (entity.Properties, error) {
var p entity.Properties
err := d.txq(ctx, func(q *db.Queries) error {
var err error
p, err = findPropertiesByUUID(ctx, q, id)
return err
})
return p, err
}
func findPropertiesByUUID(ctx context.Context, q *db.Queries, id uuid.UUID) (entity.Properties, error) {
p, err := q.Properties(ctx, id)
if err != nil {
return nil, err
}
var properties entity.Properties
if err := json.Unmarshal(p.Fields, &properties); err != nil {
return nil, fmt.Errorf("decode properties: %w", err)
}
return properties, nil
}
// ListBenchmarkPoints returns timeseries points for the given benchmark and commit index range.
func (d *DB) ListBenchmarkPoints(ctx context.Context, b *entity.Benchmark, r entity.CommitIndexRange) (entity.Points, error) {
var ps []*entity.Point
err := d.txq(ctx, func(q *db.Queries) error {
var err error
ps, err = listBenchmarkPoints(ctx, q, b, r)
return err
})
return ps, err
}
func listBenchmarkPoints(ctx context.Context, q *db.Queries, b *entity.Benchmark, r entity.CommitIndexRange) (entity.Points, error) {
benchmarkUUID := b.UUID()
ps, err := q.BenchmarkPoints(ctx, db.BenchmarkPointsParams{
BenchmarkUUID: benchmarkUUID,
CommitIndexMin: int32(r.Min),
CommitIndexMax: int32(r.Max),
})
if err != nil {
return nil, err
}
// Convert to point objects. Reverse at the same time, since the query returns in descending order.
output := make(entity.Points, len(ps))
for i, p := range ps {
output[i] = &entity.Point{
ResultUUID: p.ResultUUID,
BenchmarkUUID: benchmarkUUID,
EnvironmentUUID: p.EnvironmentUUID,
CommitSHA: hex.EncodeToString(p.CommitSHA),
CommitIndex: int(p.CommitIndex),
Value: p.Value,
}
}
return output, nil
}
// ListTracePoints returns trace points for the given commit range.
func (d *DB) ListTracePoints(ctx context.Context, r entity.CommitIndexRange) ([]trace.Point, error) {
var ps []trace.Point
err := d.txq(ctx, func(q *db.Queries) error {
var err error
ps, err = listTracePoints(ctx, q, r)
return err
})
return ps, err
}
func listTracePoints(ctx context.Context, q *db.Queries, r entity.CommitIndexRange) ([]trace.Point, error) {
ps, err := q.TracePoints(ctx, db.TracePointsParams{
CommitIndexMin: int32(r.Min),
CommitIndexMax: int32(r.Max),
})
if err != nil {
return nil, err
}
// Convert to trace point objects.
output := make([]trace.Point, len(ps))
for i, p := range ps {
output[i] = trace.Point{
ID: trace.ID{
BenchmarkUUID: p.BenchmarkUUID,
EnvironmentUUID: p.EnvironmentUUID,
},
IndexedValue: trace.IndexedValue{
CommitIndex: int(p.CommitIndex),
Value: p.Value,
},
}
}
return output, nil
}
// Trace returns a specific trace between the given commit range.
func (d *DB) Trace(ctx context.Context, id trace.ID, r entity.CommitIndexRange) (*trace.Trace, error) {
var t *trace.Trace
err := d.txq(ctx, func(q *db.Queries) error {
var err error
t, err = getTrace(ctx, q, id, r)
return err
})
return t, err
}
func getTrace(ctx context.Context, q *db.Queries, id trace.ID, r entity.CommitIndexRange) (*trace.Trace, error) {
rows, err := q.Trace(ctx, db.TraceParams{
BenchmarkUUID: id.BenchmarkUUID,
EnvironmentUUID: id.EnvironmentUUID,
CommitIndexMin: int32(r.Min),
CommitIndexMax: int32(r.Max),
})
if err != nil {
return nil, err
}
// Convert to trace series.
t := &trace.Trace{ID: id}
for _, row := range rows {
t.Series = append(t.Series, trace.IndexedValue{
CommitIndex: int(row.CommitIndex),
Value: row.Value,
})
}
return t, nil
}