/
CAPIv1.cpp
473 lines (384 loc) · 13.6 KB
/
CAPIv1.cpp
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
// =============================================================================
// CADET - The Chromatography Analysis and Design Toolkit
//
// Copyright © 2008-2020: The CADET Authors
// Please see the AUTHORS and CONTRIBUTORS file.
//
// All rights reserved. This program and the accompanying materials
// are made available under the terms of the GNU Public License v3.0 (or, at
// your option, any later version) which accompanies this distribution, and
// is available at http://www.gnu.org/licenses/gpl.html
// =============================================================================
#include "cadet/cadet.h"
#include "common/CompilerSpecific.hpp"
#include "cadet/ParameterProvider.hpp"
#include "cadet/Exceptions.hpp"
#include "common/Driver.hpp"
#include "LoggingUtils.hpp"
#include "Logging.hpp"
extern "C"
{
struct cdtDriver
{
cadet::Driver* driver;
};
}
namespace cadet
{
namespace api
{
namespace v1
{
cdtDriver* createDriver()
{
return new cdtDriver{ new cadet::Driver() };
}
void deleteDriver(cdtDriver* drv)
{
if (!drv)
return;
if (!drv->driver)
return;
delete drv->driver;
drv->driver = nullptr;
}
/**
* @brief ParameterProvider implementation using C callback functions
*/
class CallbackParameterProvider : public IParameterProvider
{
public:
CallbackParameterProvider(const cdtParameterProvider& pp) : _pp(pp)
{
if (!pp.getDouble)
throw InvalidParameterException("ParameterProvider does not implement getDouble()");
if (!pp.getInt)
throw InvalidParameterException("ParameterProvider does not implement getInt()");
if (!pp.getBool)
throw InvalidParameterException("ParameterProvider does not implement getBool()");
if (!pp.getString)
throw InvalidParameterException("ParameterProvider does not implement getString()");
if (!pp.getDoubleArray && !pp.getDoubleArrayItem)
throw InvalidParameterException("ParameterProvider does neither implement getDoubleArray() nor getDoubleArrayItem()");
if (!pp.getIntArray && !pp.getIntArrayItem)
throw InvalidParameterException("ParameterProvider does neither implement getIntArray() nor getIntArrayItem()");
if (!pp.getBoolArray && !pp.getBoolArrayItem)
throw InvalidParameterException("ParameterProvider does neither implement getBoolArray() nor getBoolArrayItem()");
if (!pp.getStringArray && !pp.getStringArrayItem)
throw InvalidParameterException("ParameterProvider does neither implement getStringArray() nor getStringArrayItem()");
if (!pp.exists)
throw InvalidParameterException("ParameterProvider does not implement exists()");
if (!pp.isArray)
throw InvalidParameterException("ParameterProvider does not implement isArray()");
if (!pp.numElements)
throw InvalidParameterException("ParameterProvider does not implement numElements()");
if (!pp.pushScope)
throw InvalidParameterException("ParameterProvider does not implement pushScope()");
if (!pp.popScope)
throw InvalidParameterException("ParameterProvider does not implement popScope()");
}
virtual ~CallbackParameterProvider() CADET_NOEXCEPT { }
virtual double getDouble(const std::string& paramName)
{
double v = 0.0;
if (CADET_ERR(_pp.getDouble(_pp.userData, paramName.c_str(), &v)))
throw InvalidParameterException("Retrieving double parameter " + paramName + " failed");
LOG(Debug) << "GET scalar [double] " << paramName << ": " << v;
return v;
}
virtual int getInt(const std::string& paramName)
{
int v = 0;
if (CADET_ERR(_pp.getInt(_pp.userData, paramName.c_str(), &v)))
throw InvalidParameterException("Retrieving int parameter " + paramName + " failed");
LOG(Debug) << "GET scalar [int] " << paramName << ": " << v;
return v;
}
virtual uint64_t getUint64(const std::string& paramName)
{
throw std::logic_error("getUint64 not implemented");
}
virtual bool getBool(const std::string& paramName)
{
uint8_t v = 0;
if (CADET_ERR(_pp.getBool(_pp.userData, paramName.c_str(), &v)))
throw InvalidParameterException("Retrieving bool parameter " + paramName + " failed");
LOG(Debug) << "GET scalar [bool] " << paramName << ": " << bool(v);
return v;
}
virtual std::string getString(const std::string& paramName)
{
char const* v = nullptr;
if (CADET_ERR(_pp.getString(_pp.userData, paramName.c_str(), &v)))
throw InvalidParameterException("Retrieving string parameter " + paramName + " failed");
if (!v)
throw InvalidParameterException("Retrieving string parameter " + paramName + " failed (received nullptr)");
LOG(Debug) << "GET scalar [string] " << paramName << ": " << v << " (mem: " << static_cast<void*>(&v) << " " << static_cast<void const*>(v) << ")";
return std::string(v);
}
virtual std::vector<double> getDoubleArray(const std::string& paramName)
{
if (_pp.getDoubleArray)
{
int num = 0;
double* v = nullptr;
if (CADET_ERR(_pp.getDoubleArray(_pp.userData, paramName.c_str(), &num, &v)))
{
if (_pp.getDoubleArrayItem)
return getDoubleArrayElementwise(paramName);
else
throw InvalidParameterException("Retrieving double parameter array " + paramName + " failed");
}
LOG(Debug) << "GET array [double] " << paramName << ": " << log::VectorPtr<double>(v, num);
return std::vector<double>(v, v + num);
}
return getDoubleArrayElementwise(paramName);
}
virtual std::vector<int> getIntArray(const std::string& paramName)
{
if (_pp.getIntArray)
{
int num = 0;
int* v = nullptr;
if (CADET_ERR(_pp.getIntArray(_pp.userData, paramName.c_str(), &num, &v)))
{
if (_pp.getIntArrayItem)
return getIntArrayElementwise(paramName);
else
throw InvalidParameterException("Retrieving int parameter array " + paramName + " failed");
}
LOG(Debug) << "GET array [int] " << paramName << ": " << log::VectorPtr<int>(v, num);
return std::vector<int>(v, v + num);
}
return getIntArrayElementwise(paramName);
}
virtual std::vector<uint64_t> getUint64Array(const std::string& paramName)
{
throw std::logic_error("getUint64Array not implemented");
}
virtual std::vector<bool> getBoolArray(const std::string& paramName)
{
if (_pp.getBoolArray)
{
int num = 0;
uint8_t* v = nullptr;
if (CADET_ERR(_pp.getBoolArray(_pp.userData, paramName.c_str(), &num, &v)))
{
if (_pp.getBoolArrayItem)
return getBoolArrayElementwise(paramName);
else
throw InvalidParameterException("Retrieving bool parameter array " + paramName + " failed");
}
std::vector<bool> vc(num);
for (int i = 0; i < num; ++i)
vc[i] = v[i];
LOG(Debug) << "GET array [bool] " << paramName << ": " << vc;
return vc;
}
return getBoolArrayElementwise(paramName);
}
virtual std::vector<std::string> getStringArray(const std::string& paramName)
{
if (_pp.getStringArray)
{
int num = 0;
char const** v = nullptr;
if (CADET_ERR(_pp.getStringArray(_pp.userData, paramName.c_str(), &num, &v)))
{
if (_pp.getStringArrayItem)
return getStringArrayElementwise(paramName);
else
throw InvalidParameterException("Retrieving string parameter array " + paramName + " failed");
}
std::vector<std::string> vc(num);
for (int i = 0; i < num; ++i)
vc[i] = v[i];
LOG(Debug) << "GET array [string] " << paramName << ": " << vc;
return vc;
}
return getStringArrayElementwise(paramName);
}
virtual bool exists(const std::string& paramName)
{
const bool r = _pp.exists(_pp.userData, paramName.c_str()) != 0;
LOG(Debug) << "EXISTS " << paramName << ": " << r;
return r;
}
virtual bool isArray(const std::string& paramName)
{
uint8_t res = 0;
if (CADET_ERR(_pp.isArray(_pp.userData, paramName.c_str(), &res)))
throw InvalidParameterException("Checking whether parameter " + paramName + " is array failed");
LOG(Debug) << "ISARRAY " << paramName << ": " << (res != 0);
return res != 0;
}
virtual std::size_t numElements(const std::string& paramName)
{
const int num = _pp.numElements(_pp.userData, paramName.c_str());
if (num < 0)
throw InvalidParameterException("Retrieving string parameter array " + paramName + " failed (does not exist)");
LOG(Debug) << "NUMELEMENTS " << paramName << ": " << num;
return num;
}
virtual void pushScope(const std::string& scope)
{
if (CADET_ERR(_pp.pushScope(_pp.userData, scope.c_str())))
throw InvalidParameterException("Failed to enter scope " + scope);
LOG(Debug) << "PUSHSCOPE " << scope;
}
virtual void popScope()
{
if (CADET_ERR(_pp.popScope(_pp.userData)))
throw InvalidParameterException("Failed to exit current scope");
LOG(Debug) << "POPSCOPE";
}
private:
const cdtParameterProvider& _pp;
std::vector<double> getDoubleArrayElementwise(const std::string& paramName)
{
const int num = _pp.numElements(_pp.userData, paramName.c_str());
if (num < 0)
throw InvalidParameterException("Retrieving double parameter array " + paramName + " failed (does not exist)");
if (num == 0)
return std::vector<double>(0);
std::vector<double> v(num);
for (int i = 0; i < num; ++i)
{
if (CADET_ERR(_pp.getDoubleArrayItem(_pp.userData, paramName.c_str(), i, v.data() + i)))
throw InvalidParameterException("Retrieving double parameter " + paramName + " failed");
LOG(Debug) << "GET array (" << i << ") [double] " << paramName << ": " << v[i];
}
return v;
}
std::vector<int> getIntArrayElementwise(const std::string& paramName)
{
const int num = _pp.numElements(_pp.userData, paramName.c_str());
if (num < 0)
throw InvalidParameterException("Retrieving int parameter array " + paramName + " failed (does not exist)");
if (num == 0)
return std::vector<int>(0);
std::vector<int> v(num);
for (int i = 0; i < num; ++i)
{
if (CADET_ERR(_pp.getIntArrayItem(_pp.userData, paramName.c_str(), i, v.data() + i)))
throw InvalidParameterException("Retrieving int parameter " + paramName + " failed");
LOG(Debug) << "GET array (" << i << ") [int] " << paramName << ": " << v[i];
}
return v;
}
std::vector<bool> getBoolArrayElementwise(const std::string& paramName)
{
const int num = _pp.numElements(_pp.userData, paramName.c_str());
if (num < 0)
throw InvalidParameterException("Retrieving bool parameter array " + paramName + " failed (does not exist)");
if (num == 0)
return std::vector<bool>(0);
std::vector<bool> v(num);
for (int i = 0; i < num; ++i)
{
uint8_t temp = 0;
if (CADET_ERR(_pp.getBoolArrayItem(_pp.userData, paramName.c_str(), i, &temp)))
throw InvalidParameterException("Retrieving bool parameter " + paramName + " failed");
v[i] = temp;
LOG(Debug) << "GET array (" << i << ") [bool] " << paramName << ": " << v[i];
}
return v;
}
std::vector<std::string> getStringArrayElementwise(const std::string& paramName)
{
const int num = _pp.numElements(_pp.userData, paramName.c_str());
if (num < 0)
throw InvalidParameterException("Retrieving string parameter array " + paramName + " failed (does not exist)");
if (num == 0)
return std::vector<std::string>(0);
std::vector<std::string> v(num);
for (int i = 0; i < num; ++i)
{
char const* temp = nullptr;
if (CADET_ERR(_pp.getStringArrayItem(_pp.userData, paramName.c_str(), i, &temp)))
throw InvalidParameterException("Retrieving string parameter " + paramName + " failed");
if (!temp)
throw InvalidParameterException("Retrieving string parameter " + paramName + " failed (received nullptr)");
v[i] = temp;
LOG(Debug) << "GET array (" << i << ") [string] " << paramName << ": " << v[i];
}
return v;
}
};
cdtResult runSimulation(cdtDriver* drv, cdtParameterProvider const* paramProvider)
{
Driver* const realDrv = drv->driver;
if (!realDrv)
return cdtErrorInvalidInputs;
if (!paramProvider)
return cdtErrorInvalidInputs;
try
{
if (!realDrv->simulator())
{
CallbackParameterProvider cpp(*paramProvider);
realDrv->configure(cpp);
}
else
realDrv->clearResults();
realDrv->run();
// cadet::mex::MatlabReaderWriter writer(&output);
// drv.write(writer);
}
catch(const std::exception& e)
{
LOG(Error) << "Simulation failed: " << e.what();
return cdtError;
}
return cdtOK;
}
cdtResult getSolutionOutlet(cdtDriver* drv, int unitOpId, double const** time, double const** data, int* nTime, int* nPort, int* nComp)
{
Driver* const realDrv = drv->driver;
if (!realDrv)
return cdtErrorInvalidInputs;
InternalStorageSystemRecorder* const sysRec = realDrv->solution();
if (!sysRec)
{
LOG(Error) << "System solution recorder not available";
return cdtError;
}
if (nTime)
*nTime = sysRec->numDataPoints();
if (time)
*time = sysRec->time();
InternalStorageUnitOpRecorder* const unitRec = sysRec->unitOperation(unitOpId);
if (!unitRec)
{
LOG(Error) << "Solution recorder for unit ID " << unitOpId << " not found";
return cdtErrorInvalidInputs;
}
if (!unitRec->solutionConfig().storeOutlet)
{
LOG(Error) << "Outlet of unit " << unitOpId << " not recorded";
return cdtError;
}
if (nPort)
*nPort = unitRec->numOutletPorts();
if (nComp)
*nComp = unitRec->numComponents();
if (data)
*data = unitRec->outlet();
return cdtOK;
}
} // namespace v1
} // namespace api
} // namespace cadet
extern "C"
{
CADET_API cdtResult cdtGetAPIv010000(cdtAPIv010000* ptr)
{
if (!ptr)
return cdtErrorInvalidInputs;
ptr->createDriver = &cadet::api::v1::createDriver;
ptr->deleteDriver = &cadet::api::v1::deleteDriver;
ptr->runSimulation = &cadet::api::v1::runSimulation;
ptr->getSolutionOutlet = &cadet::api::v1::getSolutionOutlet;
return cdtOK;
}
}