Improve HeatMap Color Range to Taxonomy

[Nilad]

Hi,

Is it possible to have a special range color for taxonomist user or the possibility to define (by a configuration file) a range by color ?

For the taxonomist user, they like to have a color range of 100% ANI, 99%-95%, 94%-83%, 82%-70% and 70%-0%.

Thanks for your work.

Have a good day.

[moshi4]

Hi, @Nilad

Thank you for your suggestions for functionality improvements.
I am glad that this is my first issue for my OSS.

I thought the feature you mentioned was useful, so I implemented it in the new v1.1.0 version.
It is designed to allow specifying color range values via command option --cmap_ranges.

ANIclustermap v1.1.0 is already available in pip install.
It will take about 1 to 2 days to be available from conda install.

Example1

Test dataset = small_dataset (Click link to download)

ANIclustermap -i ./small_dataset -o ./cmap_ranges_example1 --fig_width 15 --annotation \
              --cmap_ranges 70,82,95,100,100

Example2

ANIclustermap -i ./small_dataset -o ./cmap_ranges_example2 --fig_width 15 --annotation \
              --cmap_ranges 80,85,90,95,100 --cmap_colors cyan,blue