-
Notifications
You must be signed in to change notification settings - Fork 188
/
test_trajectory.py
819 lines (697 loc) · 30.2 KB
/
test_trajectory.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
# -*- coding: utf-8 -*-
import pytest
import pandas as pd
from pandas.testing import assert_frame_equal
from geopandas import GeoDataFrame
from shapely.geometry import Point, LineString
from datetime import datetime, timedelta
from fiona.crs import from_epsg
from movingpandas.trajectory import (
Trajectory,
DIRECTION_COL_NAME,
SPEED_COL_NAME,
ACCELERATION_COL_NAME,
DISTANCE_COL_NAME,
TIMEDELTA_COL_NAME,
TRAJ_ID_COL_NAME,
MissingCRSWarning,
)
from . import requires_holoviews, has_holoviews
CRS_METRIC = from_epsg(31256)
CRS_LATLON = from_epsg(4326)
def assert_frame_not_equal(*args, **kwargs):
# Taken from https://stackoverflow.com/a/38778401/6046019
try:
assert_frame_equal(*args, **kwargs)
except AssertionError:
# frames are not equal
pass
else:
# frames are equal
raise AssertionError
class Node:
def __init__(
self,
x=0,
y=0,
year=1970,
month=1,
day=1,
hour=0,
minute=0,
second=0,
millisec=0,
value=0,
):
self.geometry = Point(x, y)
self.t = datetime(year, month, day, hour, minute, second, millisec)
self.value = value
def to_dict(self):
return {"geometry": self.geometry, "t": self.t, "value": self.value}
class TestPoint(Point):
def __init__(self, data, *args, **kwargs):
super().__init__(data, *args, **kwargs)
def make_traj(nodes, crs=CRS_METRIC, id=1, parent=None):
nodes = [node.to_dict() for node in nodes]
df = pd.DataFrame(nodes).set_index("t")
gdf = GeoDataFrame(df)
if crs:
gdf = gdf.set_crs(crs=crs, allow_override=True)
return Trajectory(gdf, id, parent=parent)
class TestTrajectory:
def setup_method(self):
nodes = [
Node(0, 0, 1970, 1, 1, 0, 0, 0, 0, 1),
Node(6, 0, 1970, 1, 1, 0, 0, 10, 0, 2),
Node(10, 0, 1970, 1, 1, 0, 0, 20, 0, 3),
Node(10, 10, 1970, 1, 1, 0, 0, 30, 0, 4),
Node(0, 10, 1970, 1, 1, 0, 0, 40, 0, 5),
]
self.default_traj_metric = make_traj(nodes[:3], CRS_METRIC)
self.default_traj_latlon = make_traj(nodes[:3], CRS_LATLON)
self.default_traj_metric_5 = make_traj(nodes, CRS_METRIC)
def test_latlon(self):
traj = make_traj([Node(0, 0), Node(10, 10, day=2)], CRS_LATLON)
assert traj.to_linestring().wkt == "LINESTRING (0 0, 10 10)"
def test_without_crs(self):
with pytest.warns(MissingCRSWarning):
traj = make_traj([Node(0, 0), Node(10, 10, day=2)], None)
assert traj.to_linestring().wkt == "LINESTRING (0 0, 10 10)"
def test_str(self):
traj = make_traj([Node(0, 0), Node(0, 1, day=2)], CRS_METRIC)
assert (
str(traj)
== "Trajectory 1 (1970-01-01 00:00:00 to 1970-01-02 00:00:00) | Size: 2 | "
"Length: 1.0m\nBounds: (0.0, 0.0, 0.0, 1.0)\nLINESTRING (0 0, 0 1)"
)
def test_size(self):
assert self.default_traj_metric.size() == 3
assert self.default_traj_metric_5.size() == 5
def test_endlocation(self):
assert self.default_traj_metric.get_end_location() == Point(10, 0)
def test_write_linestring_wkt(self):
assert (
self.default_traj_metric.to_linestring().wkt
== "LINESTRING (0 0, 6 0, 10 0)"
)
def test_write_linestring_m_wkt_with_unix_time(self):
assert (
self.default_traj_metric.to_linestringm_wkt()
== "LINESTRING M (0.0 0.0 0.0, 6.0 0.0 10.0, 10.0 0.0 20.0)"
)
def test_get_position_at_existing_timestamp(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 10), method="nearest"
)
assert pos == Point(6, 0)
def test_get_position_with_invalid_method(self):
with pytest.raises(ValueError):
self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 10), method="xxx"
)
def test_get_interpolated_position_at_existing_timestamp(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 10), method="interpolated"
)
assert pos == Point(6, 0)
# TODO: If possible use parameterized tests here ...
def test_get_position_of_nearest_timestamp_1(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 9), method="nearest"
)
assert pos == Point(6, 0)
def test_get_position_of_nearest_timestamp_2(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 15), method="nearest"
)
assert pos == Point(10, 0)
def test_get_position_interpolated_at_timestamp_1(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 14), method="interpolated"
)
assert pos == Point(6 + 4 / 10 * 4, 0)
def test_get_position_interpolated_at_timestamp_2(self):
pos = self.default_traj_metric.get_position_at(
datetime(1970, 1, 1, 0, 0, 15), method="interpolated"
)
assert pos == Point(6 + 4 / 10 * 5, 0)
def test_get_segment_between_existing_timestamps(self):
segment = self.default_traj_metric_5.get_segment_between(
datetime(1970, 1, 1, 0, 0, 10), datetime(1970, 1, 1, 0, 0, 30)
)
expected = make_traj(
[Node(6, 0, second=10), Node(10, 0, second=20), Node(10, 10, second=30)],
parent=self.default_traj_metric_5,
id="1_1970-01-01 00:00:10",
)
assert segment == expected
not_expected = make_traj(
[Node(6, 0, second=10), Node(10, 0, second=20), Node(10, 10, second=40)],
parent=self.default_traj_metric_5,
)
assert segment != not_expected
def test_get_segment_between_new_timestamps(self):
segment = self.default_traj_metric_5.get_segment_between(
datetime(1970, 1, 1, 0, 0, 5), datetime(1970, 1, 1, 0, 0, 25)
)
expected = make_traj(
[Node(6, 0, second=10), Node(10, 0, second=20)],
parent=self.default_traj_metric_5,
id="1_1970-01-01 00:00:05",
)
assert segment == expected
def test_get_segment_between_start_and_end(self):
segment = self.default_traj_metric_5.get_segment_between(
self.default_traj_metric_5.get_start_time(),
self.default_traj_metric_5.get_end_time(),
)
assert (
segment.to_linestring().wkt
== self.default_traj_metric_5.to_linestring().wkt
)
def test_get_linestring_between_interpolate(self):
result = self.default_traj_metric_5.get_linestring_between(
datetime(1970, 1, 1, 0, 0, 5),
datetime(1970, 1, 1, 0, 0, 25),
method="interpolated",
).wkt
assert result == "LINESTRING (3 0, 6 0, 10 0, 10 5)"
def test_get_linestring_between_interpolate_existing_timestamps(self):
result = self.default_traj_metric_5.get_linestring_between(
datetime(1970, 1, 1, 0, 0, 10),
datetime(1970, 1, 1, 0, 0, 15),
method="interpolated",
).wkt
assert result == "LINESTRING (6 0, 8 0)"
def test_get_linestring_between_interpolate_ValueError(self):
# test for https://github.com/anitagraser/movingpandas/issues/118
# (not sure what causes this problem)
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "t": datetime(2018, 1, 1, 12, 0, 0)},
{"geometry": Point(6, 0), "t": datetime(2018, 1, 1, 12, 6, 0)},
{"geometry": Point(6, 6), "t": datetime(2018, 1, 1, 12, 10, 0)},
{"geometry": Point(9, 9), "t": datetime(2018, 1, 1, 12, 15, 0)},
]
).set_index("t")
toy_traj = Trajectory(GeoDataFrame(df, crs=31256), 1)
result = toy_traj.get_linestring_between(
datetime(2018, 1, 1, 12, 6, 0),
datetime(2018, 1, 1, 12, 11, 0),
method="interpolated",
).wkt
assert result == "LINESTRING (6 0, 6 6, 6.6 6.6)"
def test_get_linestring_between_within(self):
result = self.default_traj_metric_5.get_linestring_between(
datetime(1970, 1, 1, 0, 0, 5),
datetime(1970, 1, 1, 0, 0, 25),
method="within",
).wkt
assert result == "LINESTRING (6 0, 10 0)"
def test_add_traj_id(self):
traj = self.default_traj_metric
traj.add_traj_id()
assert traj.df[TRAJ_ID_COL_NAME].tolist() == [1, 1, 1]
def test_add_traj_id_overwrite_raises_error(self):
df = self.default_traj_metric.df.copy()
df[TRAJ_ID_COL_NAME] = 1
traj = Trajectory(df, "b")
with pytest.raises(RuntimeError):
traj.add_traj_id()
def test_add_traj_id_can_overwrite(self):
df = self.default_traj_metric.df.copy()
df[TRAJ_ID_COL_NAME] = 1
traj = Trajectory(df, "b")
traj.add_traj_id(overwrite=True)
assert traj.df[TRAJ_ID_COL_NAME].tolist() == ["b", "b", "b"]
def test_add_direction(self):
traj = make_traj(
[Node(0, 0), Node(6, 0, day=2), Node(6, -6, day=3), Node(-6, -6, day=4)]
)
traj.add_direction()
assert traj.df[DIRECTION_COL_NAME].tolist() == [90.0, 90.0, 180.0, 270]
def test_add_direction_with_name(self):
traj = make_traj(
[Node(0, 0), Node(6, 0, day=2), Node(6, -6, day=3), Node(-6, -6, day=4)]
)
traj.add_direction(name="direction2")
assert "direction2" in traj.df.columns
def test_add_direction_doesnt_change_existing_direction(self):
traj = self.default_traj_metric_5.copy()
traj.df[DIRECTION_COL_NAME] = [0, 90, 180, 270, 0]
traj.add_direction(name="direction2")
assert list(traj.df[DIRECTION_COL_NAME]) == [0, 90, 180, 270, 0]
assert_frame_not_equal(traj.df[DIRECTION_COL_NAME], traj.df["direction2"])
def test_add_direction_only_adds_direction_col_and_doesnt_otherwise_alter_df(self):
traj = self.default_traj_metric_5.copy()
traj.add_direction()
traj.df = traj.df.drop(columns=[DIRECTION_COL_NAME])
assert_frame_equal(self.default_traj_metric_5.df, traj.df)
def test_add_direction_latlon(self):
traj = make_traj([Node(0, 0), Node(10, 10, day=2)], CRS_LATLON)
traj.add_direction()
result = traj.df[DIRECTION_COL_NAME].tolist()
assert result[0] == pytest.approx(44.561451413257714, 5)
assert result[1] == pytest.approx(44.561451413257714, 5)
def test_add_direction_can_overwrite(self):
traj = make_traj(
[Node(0, 0), Node(6, 0, day=2), Node(6, -6, day=3), Node(-6, -6, day=4)]
)
traj.add_direction()
traj.add_direction(overwrite=True)
assert traj.df[DIRECTION_COL_NAME].tolist() == [90.0, 90.0, 180.0, 270]
def test_add_direction_overwrite_raises_error(self):
traj = make_traj(
[Node(0, 0), Node(6, 0, day=2), Node(6, -6, day=3), Node(-6, -6, day=4)]
)
traj.add_direction()
with pytest.raises(RuntimeError):
traj.add_direction()
def test_add_speed(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_speed()
assert traj.df[SPEED_COL_NAME].tolist() == [6.0, 6.0]
def test_add_speed_without_crs(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)], crs=None)
traj.add_speed()
assert traj.df[SPEED_COL_NAME].tolist() == [6.0, 6.0]
def test_add_speed_can_overwrite(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_speed()
traj.add_speed(overwrite=True)
assert traj.df[SPEED_COL_NAME].tolist() == [6.0, 6.0]
def test_add_speed_overwrite_raises_error(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_speed()
with pytest.raises(RuntimeError):
traj.add_speed()
def test_add_speed_with_name(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_speed(name="speed2")
assert "speed2" in traj.df.columns
def test_add_speed_doesnt_change_existing_speed(self):
traj = self.default_traj_metric_5.copy()
traj.df[SPEED_COL_NAME] = [1, 2, 3, 4, 5]
traj.add_speed(name="speed2")
assert list(traj.df[SPEED_COL_NAME]) == [1, 2, 3, 4, 5]
assert_frame_not_equal(traj.df[SPEED_COL_NAME], traj.df["speed2"])
def test_add_speed_only_adds_speed_column_and_doesnt_otherwise_alter_df(self):
traj = self.default_traj_metric_5.copy()
traj.add_speed()
traj.df = traj.df.drop(columns=["speed"])
assert_frame_equal(self.default_traj_metric_5.df, traj.df)
def test_add_speed_latlon(self):
traj = make_traj([Node(0, 1), Node(6, 0, second=1)], CRS_LATLON)
traj.add_speed()
assert traj.df[SPEED_COL_NAME].tolist()[0] / 1000 == pytest.approx(676.3, 1)
def test_add_speed_latlon_numerical_issues(self):
from shapely.geometry import Polygon
traj = make_traj(
[
Node(33.3545, 28.1335, 2010, 10, 4, 8),
Node(35.817, 23.78383, 2010, 10, 4, 20),
],
CRS_LATLON,
)
area_of_interest = Polygon([(30, 25), (50, 25), (50, 15), (30, 15), (30, 25)])
traj = traj.clip(area_of_interest).get_trajectory("1_0")
traj.add_speed()
traj.add_speed(overwrite=True)
def test_add_acceleration(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)])
traj.add_acceleration()
assert traj.df[ACCELERATION_COL_NAME].tolist() == [0.0, 0.0, 6.0]
def test_add_acceleration_without_crs(self):
traj = make_traj(
[Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)], crs=None
)
traj.add_acceleration()
assert traj.df[ACCELERATION_COL_NAME].tolist() == [0.0, 0.0, 6.0]
def test_add_acceleration_can_overwrite(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)])
traj.add_acceleration()
traj.add_acceleration(overwrite=True)
assert traj.df[ACCELERATION_COL_NAME].tolist() == [0.0, 0.0, 6.0]
def test_add_acceleration_overwrite_raises_error(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)])
traj.add_acceleration()
with pytest.raises(RuntimeError):
traj.add_acceleration()
def test_add_acceleration_with_name(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)])
traj.add_acceleration(name="acceleration2")
assert "acceleration2" in traj.df.columns
def test_add_acceleration_doesnt_change_existing_acceleration(self):
traj = self.default_traj_metric_5.copy()
traj.df[ACCELERATION_COL_NAME] = [1, 2, 3, 4, 5]
traj.add_acceleration(name="acceleration2")
assert list(traj.df[ACCELERATION_COL_NAME]) == [1, 2, 3, 4, 5]
assert_frame_not_equal(traj.df[ACCELERATION_COL_NAME], traj.df["acceleration2"])
def test_add_accel_only_adds_accel_column_and_doesnt_otherwise_alter_df(
self,
):
traj = self.default_traj_metric_5.copy()
traj.add_acceleration()
traj.df = traj.df.drop(columns=["acceleration"])
assert_frame_equal(self.default_traj_metric_5.df, traj.df)
def test_add_acceleration_keeps_existing_speed(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1), Node(18, 0, second=2)])
traj.add_speed()
traj.add_acceleration()
assert SPEED_COL_NAME in traj.df.columns
assert ACCELERATION_COL_NAME in traj.df.columns
def test_add_distance(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_distance()
assert traj.df[DISTANCE_COL_NAME].tolist() == [0, 6.0]
def test_add_distance_without_crs(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)], crs=None)
traj.add_distance()
assert traj.df[DISTANCE_COL_NAME].tolist() == [0, 6.0]
def test_add_distance_can_overwrite(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_distance()
traj.add_distance(overwrite=True)
assert traj.df[DISTANCE_COL_NAME].tolist() == [0, 6.0]
def test_add_distance_overwrite_raises_error(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_distance()
with pytest.raises(RuntimeError):
traj.add_distance()
def test_add_distance_with_name(self):
traj = make_traj([Node(0, 0), Node(6, 0, second=1)])
traj.add_distance(name="distance2")
assert "distance2" in traj.df.columns
def test_add_distance_doesnt_change_existing_distance(self):
traj = self.default_traj_metric_5.copy()
traj.df["distance"] = [1, 2, 3, 4, 5]
traj.add_distance(name="distance2")
assert_frame_not_equal(traj.df[DISTANCE_COL_NAME], traj.df["distance2"])
def test_add_distance_only_adds_distance_column_and_doesnt_otherwise_alter_df(self):
traj = self.default_traj_metric_5.copy()
traj.add_distance()
traj.df = traj.df.drop(columns=["distance"])
assert_frame_equal(self.default_traj_metric_5.df, traj.df)
def test_add_distance_latlon(self):
traj = make_traj([Node(0, 1), Node(6, 0, second=1)], CRS_LATLON)
traj.add_distance()
assert traj.df[DISTANCE_COL_NAME].tolist()[1] / 1000 == pytest.approx(676.3, 1)
def test_add_distance_latlon_numerical_issues(self):
from shapely.geometry import Polygon
traj = make_traj(
[
Node(33.3545, 28.1335, 2010, 10, 4, 8),
Node(35.817, 23.78383, 2010, 10, 4, 20),
],
CRS_LATLON,
)
area_of_interest = Polygon([(30, 25), (50, 25), (50, 15), (30, 15), (30, 25)])
traj = traj.clip(area_of_interest).get_trajectory("1_0")
traj.add_distance()
traj.add_distance(overwrite=True)
def test_add_timedelta(self):
traj = self.default_traj_metric.copy()
traj.add_timedelta()
deltas = traj.df[TIMEDELTA_COL_NAME].tolist()
assert pd.isnull(deltas[0])
assert deltas[1:3] == [timedelta(seconds=10)] * 2
def test_add_timedelta_overwrite_raises_error(self):
traj = self.default_traj_metric.copy()
traj.add_timedelta()
with pytest.raises(RuntimeError):
traj.add_timedelta()
def test_add_timedelta_can_overwrite(self):
traj = self.default_traj_metric.copy()
traj.add_timedelta()
traj.add_timedelta(overwrite=True)
deltas = traj.df[TIMEDELTA_COL_NAME].tolist()
assert pd.isnull(deltas[0])
assert deltas[1:3] == [timedelta(seconds=10)] * 2
def test_get_bbox(self):
result = make_traj([Node(0, 1), Node(6, 5, day=2)], CRS_LATLON).get_bbox()
assert result == (0, 1, 6, 5) # (minx, miny, maxx, maxy)
def test_get_length_spherical(self):
result = (
make_traj([Node(0, 1), Node(6, 0, day=2)], CRS_LATLON).get_length() / 1000
)
assert result == pytest.approx(676.3, 1)
def test_get_length_euclidiean(self):
result = make_traj([Node(0, 2), Node(6, 0, day=2)]).get_length()
assert result == pytest.approx(6.3, 1)
def test_get_direction(self):
result = make_traj(
[Node(0, 0), Node(-6, 10, day=1), Node(6, 6, day=2)]
).get_direction()
assert result == pytest.approx(45, 1)
def test_get_sampling_interval(self):
result = self.default_traj_metric.get_sampling_interval()
assert result == timedelta(seconds=10)
def test_get_sampling_interval_irregular(self):
result = make_traj(
[Node(), Node(1, 0, minute=1), Node(2, 0, minute=4)]
).get_sampling_interval()
assert result == timedelta(minutes=2)
def test_offset_seconds(self):
traj = self.default_traj_metric_5
traj.apply_offset_seconds("value", -20)
assert traj.df.iloc[2].value == 5
assert traj.df.iloc[2].geometry == Point(10, 0)
def test_offset_minutes(self):
traj = make_traj(
[Node(), Node(6, 0, minute=1, value=1), Node(10, 0, minute=2, value=2)]
)
traj.apply_offset_minutes("value", -2)
assert traj.df.iloc[0].value == 2
assert traj.df.iloc[0].geometry == Point(0, 0)
def test_nonchronological_input(self):
traj = make_traj([Node(0, 0, day=3), Node(1, 1, day=2), Node(2, 2, day=1)])
assert traj.get_start_time() == datetime(1970, 1, 1)
assert traj.get_end_time() == datetime(1970, 1, 3)
assert traj.get_duration() == timedelta(days=2)
assert traj.get_start_location() == Point(2, 2)
def test_plot_exists(self):
from matplotlib.axes import Axes
plot = self.default_traj_metric.plot()
assert isinstance(plot, Axes)
@requires_holoviews
def test_hvplot_exists(self):
import holoviews
plot = self.default_traj_latlon.hvplot(geo=True)
assert isinstance(plot, holoviews.core.overlay.Overlay)
assert len(plot.Path.ddims) == 2
@requires_holoviews
def test_hvplot_with_speed_exists(self):
import holoviews
plot = self.default_traj_latlon.hvplot(geo=True, c="speed")
assert isinstance(plot, holoviews.core.overlay.Overlay)
assert len(plot.Path.ddims) == 3
@requires_holoviews
def test_hvplot_exists_without_crs(self):
import holoviews
traj = make_traj([Node(0, 0), Node(10, 10, day=2)], None)
plot = traj.hvplot()
assert isinstance(plot, holoviews.core.overlay.Overlay)
def test_tolinestring_does_not_alter_df(self):
traj = self.default_traj_metric
expected = traj.df.copy()
traj.to_linestring()
assert_frame_equal(expected, traj.df)
def test_getlength_does_not_alter_df(self):
traj = self.default_traj_metric.copy()
traj.get_length()
assert_frame_equal(self.default_traj_metric.df, traj.df)
def test_str_does_not_alter_df(self):
traj = self.default_traj_metric.copy()
str(traj)
assert_frame_equal(self.default_traj_metric.df, traj.df)
def test_plot_does_not_alter_df(self):
traj = self.default_traj_metric.copy()
traj.plot(column="speed")
assert_frame_equal(self.default_traj_metric.df, traj.df)
def test_linestringbetween_does_not_alter_df(self):
traj = self.default_traj_metric.copy()
traj.get_linestring_between(
datetime(1970, 1, 1, 0, 0, 1), datetime(1970, 1, 1, 0, 0, 3)
)
assert_frame_equal(self.default_traj_metric.df, traj.df)
def test_getpositionat_does_not_alter_df(self):
traj = self.default_traj_metric.copy()
traj.get_position_at(datetime(1970, 1, 1, 0, 0, 2), method="nearest")
assert_frame_equal(self.default_traj_metric.df, traj.df)
@requires_holoviews
def test_support_for_subclasses_of_point(self):
df = pd.DataFrame(
[
{"geometry": TestPoint(0, 0), "t": datetime(2018, 1, 1, 12, 0, 0)},
{"geometry": TestPoint(6, 0), "t": datetime(2018, 1, 1, 12, 6, 0)},
{"geometry": TestPoint(6, 6), "t": datetime(2018, 1, 1, 12, 10, 0)},
]
).set_index("t")
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
traj.add_speed()
traj.add_direction()
traj.hvplot()
def test_support_for_other_geometry_column_names(self):
df = pd.DataFrame(
[
{"xxx": Point(0, 0), "t": datetime(2018, 1, 1, 12, 0, 0)},
{"xxx": Point(6, 0), "t": datetime(2018, 1, 1, 12, 6, 0)},
{"xxx": Point(6, 6), "t": datetime(2018, 1, 1, 12, 10, 0)},
]
).set_index("t")
geo_df = GeoDataFrame(df, geometry="xxx", crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
traj.add_speed()
traj.add_direction()
traj.get_bbox()
traj.get_length()
traj.get_linestring_between(
datetime(2018, 1, 1, 12, 0, 0), datetime(2018, 1, 1, 12, 6, 0)
)
traj.get_start_location()
if has_holoviews:
traj.hvplot()
traj.size()
traj.to_line_gdf()
traj.to_linestringm_wkt()
traj.to_linestring()
traj.to_point_gdf()
traj.to_traj_gdf()
def test_support_for_other_time_column_names(self):
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "xxx": datetime(2018, 1, 1, 12, 0, 0)},
{"geometry": Point(6, 0), "xxx": datetime(2018, 1, 1, 12, 6, 0)},
{"geometry": Point(6, 6), "xxx": datetime(2018, 1, 1, 12, 10, 0)},
]
).set_index("xxx")
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
traj.add_speed()
traj.add_direction()
if has_holoviews:
traj.hvplot()
traj.plot()
traj.get_length()
traj.to_linestring()
traj.to_linestringm_wkt()
def test_to_point_gdf(self):
traj = self.default_traj_metric
geo_df = traj.df.copy()
point_gdf = traj.to_point_gdf()
assert_frame_equal(point_gdf, geo_df)
def test_to_line_gdf(self):
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "t": datetime(2018, 1, 1, 12, 0, 0)},
{"geometry": Point(6, 0), "t": datetime(2018, 1, 1, 12, 6, 0)},
{"geometry": Point(6, 6), "t": datetime(2018, 1, 1, 12, 10, 0)},
]
).set_index("t")
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
line_gdf = traj.to_line_gdf()
df2 = pd.DataFrame(
[
{
"t": datetime(2018, 1, 1, 12, 6, 0),
"prev_t": datetime(2018, 1, 1, 12, 0, 0),
"geometry": LineString([(0, 0), (6, 0)]),
},
{
"t": datetime(2018, 1, 1, 12, 10, 0),
"prev_t": datetime(2018, 1, 1, 12, 6, 0),
"geometry": LineString([(6, 0), (6, 6)]),
},
]
)
expected_line_gdf = GeoDataFrame(df2, crs=CRS_METRIC)
assert_frame_equal(line_gdf, expected_line_gdf)
def test_to_traj_gdf(self):
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "t": datetime(1970, 1, 1, 0, 0, 0)},
{"geometry": Point(6, 0), "t": datetime(1970, 1, 1, 0, 6, 0)},
{"geometry": Point(6, 6), "t": datetime(1970, 1, 1, 0, 10, 0)},
]
).set_index("t")
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
traj_gdf = traj.to_traj_gdf()
props = {
"traj_id": 1,
"start_t": datetime(1970, 1, 1, 0, 0, 0),
"end_t": datetime(1970, 1, 1, 0, 10, 0),
"geometry": LineString([(0, 0), (6, 0), (6, 6)]),
"length": 12.0,
"direction": 45.0,
}
df2 = pd.DataFrame([props])
expected_line_gdf = GeoDataFrame(df2, crs=CRS_METRIC)
assert_frame_equal(traj_gdf, expected_line_gdf)
traj_gdf_wkt = traj.to_traj_gdf(wkt=True)
props["wkt"] = "LINESTRING M (0.0 0.0 0.0, 6.0 0.0 360.0, 6.0 6.0 600.0)"
df2 = pd.DataFrame([props])
expected_line_gdf_wkt = GeoDataFrame(df2, crs=CRS_METRIC)
assert_frame_equal(traj_gdf_wkt, expected_line_gdf_wkt)
def test_error_due_to_wrong_gdf_index(self):
with pytest.raises(TypeError):
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "t": datetime(1970, 1, 1, 0, 0, 0)},
{"geometry": Point(6, 0), "t": datetime(1970, 1, 1, 0, 6, 0)},
{"geometry": Point(6, 6), "t": datetime(1970, 1, 1, 0, 10, 0)},
]
)
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
Trajectory(geo_df, 1)
def test_mcp_poly(self):
mcp = self.default_traj_metric_5.get_mcp()
assert mcp.wkt == "POLYGON ((0 0, 0 10, 10 10, 10 0, 0 0))"
def test_mcp_line(self):
df = pd.DataFrame(
[
{"geometry": Point(0, 0), "t": datetime(1970, 1, 1, 0, 0, 0)},
{"geometry": Point(6, 0), "t": datetime(1970, 1, 1, 0, 6, 0)},
]
).set_index("t")
geo_df = GeoDataFrame(df, crs=CRS_METRIC)
traj = Trajectory(geo_df, 1)
mcp = traj.get_mcp()
assert mcp.wkt == "LINESTRING (0 0, 6 0)"
def test_distance(self):
traj = make_traj([Node(0, 0, day=1), Node(1, 1, day=2), Node(3, 3, day=3)])
point = Point(0, 0)
assert traj.distance(point) == 0
line = LineString([(2, 0), (2, 4), (3, 4)])
assert traj.distance(line) == 0
line = LineString([(2, 4), (3, 4)])
assert traj.distance(line) == 1
traj2 = make_traj([Node(2, 0, day=1), Node(2, 4, day=2), Node(3, 4, day=3)])
assert traj.distance(traj2) == 0
def test_distance_warning(self):
with pytest.warns(UserWarning):
point = Point(0, 0)
self.default_traj_latlon.distance(point)
def test_hausdorff_distance(self):
from math import sqrt
traj = make_traj([Node(0, 0, day=1), Node(1, 1, day=2), Node(2, 2, day=3)])
point = Point(0, 0)
assert traj.hausdorff_distance(point) == sqrt(4 + 4)
line = LineString([(2, 0), (2, 4), (3, 4)])
assert traj.hausdorff_distance(line) == sqrt(4 + 1)
traj2 = make_traj([Node(2, 0, day=1), Node(2, 4, day=2), Node(3, 4, day=3)])
assert traj.hausdorff_distance(traj2) == sqrt(4 + 1)
def test_hausdorff_distance_warning(self):
with pytest.warns(UserWarning):
point = Point(0, 0)
self.default_traj_latlon.hausdorff_distance(point)
"""
This test should work but fails in my PyCharm probably due to
https://github.com/pyproj4/pyproj/issues/134
def test_crs(self):
traj = self.default_traj_latlon
new_df = traj.df.to_crs(epsg=3857)
self.assertEqual(new_df.crs, from_epsg(3857))
"""