older.version.list.md

First release.

---- /modules/modulefiles/bioinformatics ----
bedtools/2.26.0(default)
hisat/2.0.4(default)
spades/3.10.0(default)
bowtie/2.2.9(default)
igvtools/2.3.89(default)
sratoolkit/2.8.1(default)
bwa/0.7.15(default)
picard/2.8.1(default)
star/2.5.2b(default)
cufflinks/2.2.1(default)
samtools/1.3.1(default)
stringtie/1.3.0(default)
fastqc/0.11.5(default)
skewer/0.2.2(default)
tophat/2.1.1(default)
gatk/3.4.46(default)
snpeff/4.3.i(default)
vcftools/0.1.14(default)
---- /modules/modulefiles/general ----
java/8.0.111(default)
python/2.7.12(default)
python/3.6.0
ruby-install/0.6.1(default)
jupyterhub/0.7.2(default)
rlang/3.3.2(default)
ruby/2.4.0(default)
---- /modules/modulefiles/libs ----
bzip2/1.0.6(default)
openblas/0.2.19(default)
xz/5.2.2(default)

• v0.0.2:

  Improved PS1

  Added /Dockerfiles for legacy maintenance of each version Dockerfile

  Added lofreq/2.1.2(default)

• v1.0.0:

  Moved to debian 9.1.

  Removed ENV HOME from Dockerfile.

  Replaced python 2.7.12 with 2.7.13.

• v1.0.1

  Added gsl/2.4.0

  Added methpipe/3.4.3

  Added walt/1.0.0

• v1.1.0

  Added curl libcurl3 libcurl3-dev

  Added bwtool/face601

  Added perl/5.24.1 (cpanm)

  Added jdk/8.0.151

  Added gatk/4.beta.5

• v1.1.1

  Added pkg-config libfreetype6-dev libpng-dev liblmdb-dev libmariadb-client-lgpl-dev

  Added quast/4.6.0

  Added blast/2.7.1

  Added primer3/2.4.0

  Added trimmomatic/0.36

  Added rlang/3.4.3

  Fixed python/2.7.13

  Fixed rlang/3.3.2

• v1.1.2

  Added stringtie/1.3.3

• v1.1.3

  Added libtbb2 libtbb-dev

  Added flexbar/3.0.3

  Added bowtie/1.2.2

• v1.1.4

  Added sspace/3.0.0

  Added signalp/0.4.1f

  Added targetp/0.1.1b

  Added prosite/2.3.4

  Added migec/1.2.7

  Added mixcr/2.1.9

  Added igrec/3.1.1

  Added igor/1.1.0

  Added mitools/1.5.0

  Added vdjtools/1.1.7

  Added homer/18.2.14