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Are you referring to a specific seaborn plotting function?
Generally - matplotlib's scatter can act weird with 3 points - RGB values are interpreted as colormap values. The documentation of scatter says that color would be read as rgb (not as colormap values) if it is a 2d numpy array (1 by 3). Unfortunatelly I've had problems with 1 by 3 too. Only when I passed a 3 by 3 (the same rgb vavlues for each observation) it worked well.
4 or more rows appears to use the expected color palette. However 3 uses unexpected black-grey-white colours for the points.
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