template.tex

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% AGUJournalTemplate.tex: this template file is for articles formatted with LaTeX
%
% This file includes commands and instructions
% given in the order necessary to produce a final output that will
% satisfy AGU requirements, including customized APA reference formatting.
%
% You may copy this file and give it your
% article name, and enter your text.
%
%
% Step 1: Set the \documentclass
%
%

%% To submit your paper:
% TODO - options - draft
[# if options.draft #]
\documentclass[draft]{agujournal2019}
[# else #]
\documentclass{agujournal2019}
[# endif #]

\usepackage{lineno}
\usepackage[inline]{trackchanges} %for better track changes. final new option will compile document with changes incorporated.
\usepackage{soul}
\linenumbers

[- IMPORTS -]
%%%%%%%
% As of 2018 we recommend use of the TrackChanges package to mark revisions.
% The trackchanges package adds five new LaTeX commands:
%
%  \note[editor]{The note}
%  \annote[editor]{Text to annotate}{The note}
%  \add[editor]{Text to add}
%  \remove[editor]{Text to remove}
%  \change[editor]{Text to remove}{Text to add}
%
% complete documentation is here: http://trackchanges.sourceforge.net/
%%%%%%%
[# if not options.draft #]
\draftfalse
[# endif #]

%% Enter journal name below.
%% Choose from this list of Journals:
%
% JGR: Atmospheres
% JGR: Biogeosciences
% JGR: Earth Surface
% JGR: Oceans
% JGR: Planets
% JGR: Solid Earth
% JGR: Space Physics
% Global Biogeochemical Cycles
% Geophysical Research Letters
% Paleoceanography and Paleoclimatology
% Radio Science
% Reviews of Geophysics
% Tectonics
% Space Weather
% Water Resources Research
% Geochemistry, Geophysics, Geosystems
% Journal of Advances in Modeling Earth Systems (JAMES)
% Earth's Future
% Earth and Space Science
% Geohealth
%
% ie, \journalname{Water Resources Research}

\journalname{[-options.journal_name-]}

\begin{document}

%% ------------------------------------------------------------------------ %%
%  Title
%
% (A title should be specific, informative, and brief. Use
% abbreviations only if they are defined in the abstract. Titles that
% start with general keywords then specific terms are optimized in
% searches)
%
%% ------------------------------------------------------------------------ %%

% Example: \title{This is a test title}

\title{[-doc.title-]}

%% ------------------------------------------------------------------------ %%
%
%  AUTHORS AND AFFILIATIONS
%
%% ------------------------------------------------------------------------ %%

% Authors are individuals who have significantly contributed to the
% research and preparation of the article. Group authors are allowed, if
% each author in the group is separately identified in an appendix.)

% List authors by first name or initial followed by last name and
% separated by commas. Use \affil{} to number affiliations, and
% \thanks{} for author notes.
% Additional author notes should be indicated with \thanks{} (for
% example, for current addresses).

% Example: \authors{A. B. Author\affil{1}\thanks{Current address, Antartica}, B. C. Author\affil{2,3}, and D. E.
% Author\affil{3,4}\thanks{Also funded by Monsanto.}}

\authors{
[#- for author in doc.authors -#]
[-- author.name --]
[#- if author.affiliations -#]
\affil{
[-- author.affiliations|join(",", "index") --]
}
[#- endif -#]
[#- if not loop.last #], [# endif -#]
[#- endfor -#]
}

% \affiliation{1}{First Affiliation}
% \affiliation{2}{Second Affiliation}
% \affiliation{3}{Third Affiliation}
% \affiliation{4}{Fourth Affiliation}

[# for affiliation in doc.affiliations #]
\affiliation{[-affiliation.index-]}{[-affiliation.value.name-]}
[# endfor #]
%(repeat as many times as is necessary)

%% Corresponding Author:
% Corresponding author mailing address and e-mail address:

% (include name and email addresses of the corresponding author.  More
% than one corresponding author is allowed in this LaTeX file and for
% publication; but only one corresponding author is allowed in our
% editorial system.)

% Example: \correspondingauthor{First and Last Name}{email@address.edu}

[# for author in doc.authors #]
[# if author.corresponding #]
\correspondingauthor{[-author.name-]}{[-author.email-]}
[# endif #]
[# endfor #]

%% Keypoints, final entry on title page.

%  List up to three key points (at least one is required)
%  Key Points summarize the main points and conclusions of the article
%  Each must be 140 characters or fewer with no special characters or punctuation and must be complete sentences

% Example:
% \begin{keypoints}
% \item	List up to three key points (at least one is required)
% \item	Key Points summarize the main points and conclusions of the article
% \item	Each must be 140 characters or fewer with no special characters or punctuation and must be complete sentences
% \end{keypoints}

[# if parts.keypoints #]
\begin{keypoints}
[# for keypoint in parts.keypoints #]
\item [-keypoint-]
[# endfor #]
\end{keypoints}
[# endif #]

%% ------------------------------------------------------------------------ %%
%
%  ABSTRACT and PLAIN LANGUAGE SUMMARY
%
% A good Abstract will begin with a short description of the problem
% being addressed, briefly describe the new data or analyses, then
% briefly states the main conclusion(s) and how they are supported and
% uncertainties.

% The Plain Language Summary should be written for a broad audience,
% including journalists and the science-interested public, that will not have
% a background in your field.
%
% A Plain Language Summary is required in GRL, JGR: Planets, JGR: Biogeosciences,
% JGR: Oceans, G-Cubed, Reviews of Geophysics, and JAMES.
% see http://sharingscience.agu.org/creating-plain-language-summary/)
%
%% ------------------------------------------------------------------------ %%

%% \begin{abstract} starts the second page

[# if parts.abstract #]
\begin{abstract}
[-parts.abstract-]
\end{abstract}
[# else #]
\begin{abstract}
  Your abstract here!
\end{abstract}
[# endif #]

[# if parts.summary #]
\section*{Plain Language Summary}
[-parts.summary-]
[# endif #]

[-CONTENT-]

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%Open Research
% AGU requires an Availability Statement for the underlying data needed to understand, evaluate, and build upon the reported research at the time of peer review and publication.

%Additionally, authors should include an Availability Statement for the software that has a significant impact on the research. Details and templates are in the Availability Statement section of the Data & Software for Authors Guidance:
% https://www.agu.org/Publish-with-AGU/Publish/Author-Resources/Data-and-Software-for-Authors#availability

%For physical samples, use the IGSN persistent identifier, see the International Geo Sample Numbers section:
% https://www.agu.org/Publish-with-AGU/Publish/Author-Resources/Data-and-Software-for-Authors#IGSN

[# if parts.data_availability #]
\section*{Open Research}
[-parts.data_availability-]
[# endif #]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%



[# if parts.acknowledgments #]
\acknowledgments
% This section is optional. Include any Acknowledgments here.
[-parts.acknowledgments-]
[# endif #]

%% ------------------------------------------------------------------------ %%
%% References and Citations

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% \bibliography{<name of your .bib file>} don't specify the file extension
%
% don't specify bibliographystyle
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[# if doc.bibliography #]
\bibliography{[- doc.bibliography | join(", ") -]}
[# endif #]

%Reference citation instructions and examples:
%
% Please use ONLY \cite and \citeA for reference citations.
% \cite for parenthetical references
% ...as shown in recent studies (Simpson et al., 2019)
% \citeA for in-text citations
% ...Simpson et al. (2019) have shown...
%
%
%...as shown by \citeA{jskilby}.
%...as shown by \citeA{lewin76}, \citeA{carson86}, \citeA{bartoldy02}, and \citeA{rinaldi03}.
%...has been shown \cite{jskilbye}.
%...has been shown \cite{lewin76,carson86,bartoldy02,rinaldi03}.
%... \cite <i.e.>[]{lewin76,carson86,bartoldy02,rinaldi03}.
%...has been shown by \cite <e.g.,>[and others]{lewin76}.
%
% apacite uses < > for prenotes and [ ] for postnotes
% DO NOT use other cite commands (e.g., \citet, \citep, \citeyear, \citealp, etc.).
% \nocite is okay to use to add references from your Supporting Information
%

\end{document}