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This tool allows segmenting neonate brain MRI using a subject-specific atlas. It generates an subject-specific atlas based on an atlas population and some diffusion images of the subject to segment. Then we run a single atlas method with this atlas and obtain some good results, especially for in subcortical midbrain structure.

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nagyistge/NeosegPipeline

 
 

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#NeoSegPipeline

##What is it?

This tool allows segmenting neonate brain MRI using a subject-specific atlas. It generates an subject-specific atlas based on an atlas population and some diffusion images of the subject to segment. Then we run a single atlas method with this atlas and obtain some good results, especially for in subcortical midbrain structure.

##License

See License.txt

##More information

Find the tool on NITRC

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This tool allows segmenting neonate brain MRI using a subject-specific atlas. It generates an subject-specific atlas based on an atlas population and some diffusion images of the subject to segment. Then we run a single atlas method with this atlas and obtain some good results, especially for in subcortical midbrain structure.

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  • C++ 63.6%
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