This repository contains all code used to generate Figures 2 through 5 in our manuscript on membrane potential correlated variability. The manuscript is currently under review.
To reproduce our results: i) download all code, and maintain the organization of files and folders; ii) save the directory (correlated_variability) anywhere on your computer; iii) update the 'master_folder_path' argument in the functions that generate publication figures (e.g., make_Fig2.py), to the full path of the correlated_variability folder (e.g., 'C:\Users\caleb\Desktop\correlated_variability'); iv) download the data used to generate results (to be made freely available soon!); v) save the membrane potential recordings in the folder correlated_variability\downsampled_traces, and the LFP recordings in the folder correlated_variability\downsampled_LFP_traces, maintaining the organization of the downloaded data; v) call the functions that generate publication figures (e.g., make_Fig2.py).
This README will be updated upon publication of the manuscript, and when the data becomes available.