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reinforcement.in
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reinforcement.in
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##################################################################################
#
# Reinforcement Learning
#
# Author: Nathan Jordan
# Karl Mullner
#
##################################################################################
#
#
#
# __
# ,' ,^,.
# ,-"/""/--)_\
# ,' /.
# ,' \
# | ;
# / |
# ,' ,' . ;
# (_____|_______\ :
# (o___,|o | /|,
# ( `.____,' / /.\
# /`-----._ e )
# | `. |-'
# | __,-.`. |
# `--.-'\ \_\' : |
# \_,^' ,' \
# '.____,' _,'\
# (`-|_,-'")' ,'\--._
# )=(_)= \--' `-._
# /`-' `---' `.
# / / `-.
# / / `-.
# : / `.
# |( . . ---._ `.
# |' ''' \`-. |
# / `. \ |
# / \ : |
# / \) |
# / __/ ;
# : (___ :
# | ,` `. ) ))
# | o _,-' ,'_/ ;;/ //
# |`--.____ ___,--' _,-' (__,'-'
# |`--.____`---------'____,--' ; - -'
# `. ,' / `---,-.---' /
# \/ / \ \ ____ ,'
# `./ `. `. _,--' )/
# |`-. `.,`' /
# | `-._ / :
# : `--| |
# | | |
# | | |
# | | |
# | | |
# | | :
# | | |
# | | |
# |, --. | |
# ,-' :_, --. :
# _,' _,' \
# (,',,-- __,-/ )
# `((___,--' ,-' _,--'
# (_( ,',- __,---'
# ``-`--'
#
#
###################################################################################
BRAIN
TYPE ReinforcementLearning
JOB RL1
FSV 1000
DURATION 1
SEED -999
DISTANCE NO
COLUMN_TYPE COLUMN_1
STIMULUS_INJECT STIM_INJECT_1
STIMULUS_INJECT STIM_INJECT_2
REPORT REPORT_INPUT_1
REPORT REPORT_INPUT_2
REPORT REPORT_OUTPUT_1
REPORT REPORT_OUTPUT_2
END_BRAIN
##################################################################################
#
# Columns
#
##################################################################################
COLUMN_SHELL
TYPE CSHELL_1
WIDTH 300
HEIGHT 800
LOCATION 0 800
END_COLUMN_SHELL
COLUMN
TYPE COLUMN_1
COLUMN_SHELL CSHELL_1
LAYER_TYPE LAYER_1
END_COLUMN
##################################################################################
#
# Layers
#
##################################################################################
LAYER_SHELL
TYPE LSHELL_1
LOWER 0
UPPER 100
END_LAYER_SHELL
LAYER
TYPE LAYER_1
LAYER_SHELL LSHELL_1
CELL_TYPE CELL_IN1 60
CELL_TYPE CELL_IN2 60
CELL_TYPE CELL_MIDDLE1 60
CELL_TYPE CELL_MIDDLE2 60
CELL_TYPE CELL_MIDDLE3 60
CELL_TYPE CELL_MIDDLE4 60
CELL_TYPE CELL_OUT1 60
CELL_TYPE CELL_OUT2 60
CONNECT CELL_IN1 SOMA
CELL_MIDDLE1 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_IN1 SOMA
CELL_MIDDLE3 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_IN2 SOMA
CELL_MIDDLE2 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_IN2 SOMA
CELL_MIDDLE4 SOMA
SYNAPSE_E 0.4 0
# MIDDLE LAYER
CONNECT CELL_MIDDLE1 SOMA
CELL_OUT1 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_MIDDLE3 SOMA
CELL_OUT1 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_MIDDLE2 SOMA
CELL_OUT2 SOMA
SYNAPSE_E 0.4 0
CONNECT CELL_MIDDLE4 SOMA
CELL_OUT2 SOMA
SYNAPSE_E 0.4 0
END_LAYER
##################################################################################
#
# Cells
#
##################################################################################
CELL
TYPE CELL_IN1
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_IN2
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_OUT1
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_OUT2
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_MIDDLE1
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_MIDDLE2
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_MIDDLE3
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
CELL
TYPE CELL_MIDDLE4
COMPARTMENT SOMAE SOMA 0 0 0
END_CELL
##################################################################################
#
# Compartments
#
##################################################################################
COMPARTMENT
TYPE SOMAE
SPIKESHAPE SPIKE_DEFAULT
TAU_MEMBRANE 0.020 0.0
R_MEMBRANE 180 0
THRESHOLD -47 0
VMREST -65 0
LEAK_REVERSAL 0.0 0.0
LEAK_CONDUCTANCE 0.0 0.0
END_COMPARTMENT
COMPARTMENT
TYPE SOMAI
SPIKESHAPE SPIKE_DEFAULT
TAU_MEMBRANE 0.020 0.0
R_MEMBRANE 180 0
THRESHOLD -47 0
VMREST -65 0
LEAK_REVERSAL 0.0 0.0
LEAK_CONDUCTANCE 0.0 0.0
END_COMPARTMENT
##################################################################################
#
# Spikeshape
#
##################################################################################
SPIKESHAPE
TYPE SPIKE_DEFAULT
#VOLTAGES -45 -40 -35 30 -35 -40 -45 -47 -49 -51
VOLTAGES -38 30 -38 -43
END_SPIKESHAPE
##################################################################################
#
# Stim Inject
#
##################################################################################
STIMULUS_INJECT
TYPE STIM_INJECT_1
STIM_TYPE PULSE_STIM_1
INJECT COLUMN_1 LAYER_1 CELL_IN1 SOMA 0.7
END_STIMULUS_INJECT
STIMULUS_INJECT
TYPE STIM_INJECT_2
STIM_TYPE PULSE_STIM_2
INJECT COLUMN_1 LAYER_1 CELL_IN2 SOMA 0.7
END_STIMULUS_INJECT
##################################################################################
#
# Stimulus
#
##################################################################################
STIMULUS
TYPE PULSE_STIM_1
MODE CURRENT
PATTERN PULSE
TIME_INCREMENT 0.1
FREQ_COLS 100
CELLS_PER_FREQ 1
DYN_RANGE 0 20
TIMING EXACT
SAMESEED NO
AMP_START 4
WIDTH 0.05
TIME_START 0.0 0.1 0.2 0.3 0.4
TIME_END 0.05 0.15 0.25 0.35 0.45
FREQ_START 12
END_STIMULUS
STIMULUS
TYPE PULSE_STIM_2
MODE CURRENT
PATTERN PULSE
TIME_INCREMENT 0.1
FREQ_COLS 100
CELLS_PER_FREQ 1
DYN_RANGE 0 20
TIMING EXACT
SAMESEED NO
AMP_START 4
WIDTH 0.05
TIME_START 0.05 0.15 0.25 0.35 0.45
TIME_END 0.1 0.2 0.3 0.4 0.5
FREQ_START 12
END_STIMULUS
##################################################################################
#
# Reports
#
##################################################################################
REPORT
TYPE REPORT_INPUT_1
CELLS COLUMN_1 LAYER_1 CELL_IN1 SOMA
PROB 1
REPORT_ON VOLTAGE
FILENAME IN_VOLTAGE1.txt
ASCII
FREQUENCY 1
TIME_START 0
TIME_END 30
END_REPORT
REPORT
TYPE REPORT_INPUT_2
CELLS COLUMN_1 LAYER_1 CELL_IN2 SOMA
PROB 1
REPORT_ON VOLTAGE
FILENAME IN_VOLTAGE2.txt
ASCII
FREQUENCY 1
TIME_START 0
TIME_END 30
END_REPORT
REPORT
TYPE REPORT_OUTPUT_1
CELLS COLUMN_1 LAYER_1 CELL_OUT1 SOMA
PROB 1
REPORT_ON VOLTAGE
FILENAME OUT_VOLTAGE1.txt
ASCII
FREQUENCY 1
TIME_START 0
TIME_END 30
END_REPORT
REPORT
TYPE REPORT_OUTPUT_2
CELLS COLUMN_1 LAYER_1 CELL_OUT2 SOMA
PROB 1
REPORT_ON VOLTAGE
FILENAME OUT_VOLTAGE2.txt
ASCII
FREQUENCY 1
TIME_START 0
TIME_END 30
END_REPORT
##################################################################################
#
# Synapses
#
##################################################################################
SYNAPSE
TYPE SYNAPSE_E
SYN_PSG PSG_E
SFD_LABEL NO_SFD
LEARN_LABEL HEBBIAN_BOTH
MAX_CONDUCT 0.004
DELAY 0.005 0.010
SYN_REVERSAL 0 0
ABSOLUTE_USE 0.25 0.1
END_SYNAPSE
SYNAPSE
TYPE SYNAPSE_I
SYN_PSG PSG_I
SFD_LABEL NO_SFD
LEARN_LABEL HEBBIAN_BOTH
MAX_CONDUCT 0.2
DELAY 0.005 0.005
SYN_REVERSAL -80 0
ABSOLUTE_USE 0.25 0.1
END_SYNAPSE
SYN_PSG
TYPE PSG_E
PSG_FILE ./EPSG_Vogels_FSV1k_TAU05.inc
END_SYN_PSG
SYN_PSG
TYPE PSG_I
PSG_FILE ./IPSG_Vogels_FSV1k_TAU10.inc
END_SYN_PSG
SYN_FACIL_DEPRESS
TYPE NO_SFD
SFD NONE
END_SYN_FACIL_DEPRESS
SYN_LEARNING
TYPE HEBBIAN_BOTH
LEARNING NONE
LEARNING_SHAPE TRIANGLE
END_SYN_LEARNING