/
loading_plan_schema.json
181 lines (173 loc) · 6.56 KB
/
loading_plan_schema.json
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{
"$schema": "http://json-schema.org/draft-04/schema#",
"title": "NDEx TSV Loading Plan",
"description": "Loading plan used by TSV loader",
"definitions": {
"NodeMapping": {
"type": "object",
"properties": {
"rep_prefix": {
"description": "Prefix that need to be added to the id column",
"type": "string"
},
"rep_column": {
"description": "Column that will be used as the represent field of a node. The first non-empty value in the list will be used to populate the node represent field.",
"type": "string"
},
"node_name_column": {
"description": "The name of a node. If rep_column is missing in this object, the node_name will be used as a unique id of a node. This version of TSV loader requires node name to be unique in a network",
"type": "string"
},
"property_columns": {
"description": "Defines the mapping of all node properties. An Each of the non-empty value in these columns ",
"type": "array",
"items" : { "oneOf": [
{"type" : "string"},
{"type" : "object",
"properties": {
"column_name": {
"description": "name of the column in the spreadsheet",
"type":"string"
},
"attribute_name": {
"description": "attribute_name this column maps to",
"type": "string"
},
"value_prefix": {
"description": "prefix that need to be added to the values of this attributes(without colon).",
"type": "string"
},
"data_type": {
"description": "data type of the attribute values, default is string",
"type": "string",
"enum": ["string", "double", "boolean", "integer" ,"long", "list_of_string",
"list_of_double", "list_of_boolean", "list_of_integer", "list_of_long"]
},
"delimiter": {
"description": "delimiter character for array data types",
"type": "string"
},
"default_value": {
"description": "default value of this property when column_name is missing or the value in that column is missing",
"type": "string"
}
},
"additionalProperties": false,
"anyOf": [
{
"type":"object",
"required": ["column_name"]
},
{
"type":"object",
"required": ["attribute_name"]
}
]
}
]
}
}
},
"additionalProperties": false,
"anyOf": [
{
"type":"object",
"required": ["rep_column"]
},
{
"type":"object",
"required": ["node_name_column"]
}
]
}
},
"type": "object",
"properties": {
"context": {
"description": "Declare the namespaces that are used in this TSV file.",
"type": "object",
"patternProperties": {
"^[^/@\\$\\^]+$": {
"type": "string",
"format": "uniref"
}
},
"additionalProperties": false
},
"source_plan": {
"description": "Mapping of the source nodes",
"$ref": "#/definitions/NodeMapping"
},
"target_plan": {
"description": "Mapping of the target nodes",
"$ref": "#/definitions/NodeMapping"
},
"edge_plan": {
"type": "object",
"properties": {
"default_predicate": {
"description": "default value for edge name (interaction name).",
"type": "string"
},
"predicate_id_column": {
"description": "column that specify the edge name. If the value in this cell is missing, we will use the value defined in 'defalut_predicate', if it exists.",
"type": "string"
},
"predicate_prefix": {
"type": "string"
},
"property_columns": {
"type": "array",
"items": { "oneOf": [
{"type" : "string"},
{"type" : "object",
"properties": {
"column_name": {
"description": "name of the column in the spreadsheet",
"type":"string"
},
"attribute_name": {
"description": "attribute_name this column maps to",
"type": "string"
},
"value_prefix": {
"description": "prefix that need to be added to the values of this attributes(without colon).",
"type": "string"
},
"data_type": {
"description": "data type of the attribute values, default is string",
"type": "string",
"enum": ["string","double","boolean","integer","long","list_of_string",
"list_of_double","list_of_boolean", "list_of_integer", "list_of_long"]
},
"delimiter": {
"description": "delimiter character for array data types",
"type": "string"
},
"default_value": {
"description": "default value of this property when column_name is missing or the value in that column is missing",
"type": "string"
}
},
"additionalProperties": false,
"anyOf": [
{
"type":"object",
"required": ["column_name"]
},
{
"type":"object",
"required": ["attribute_name"]
}
]
}
]
}
}
},
"additionalProperties": false
}
},
"additionalProperties": false,
"required": ["source_plan","target_plan","edge_plan"]
}