Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Hemi, PnPn-2 #67

Closed
RonRahaman opened this issue May 11, 2017 · 8 comments
Closed

Hemi, PnPn-2 #67

RonRahaman opened this issue May 11, 2017 · 8 comments

Comments

@RonRahaman
Copy link
Contributor

The Hemi, PnPn-2 test case fails at link time with the following error:

mpif77 -o nek5000 obj/hemi.o obj/drive.o obj/drive1.o obj/drive2.o obj/plan4.o obj/bdry.o obj/coef.o obj/conduct.o obj/connect1.o obj/connect2.o obj/dssum.o obj/edgec.o obj/eigsolv.o obj/gauss.o obj/genxyz.o obj/navier1.o obj/makeq.o obj/navier0.o obj/navier2.o obj/navier3.o obj/navier4.o obj/prepost.o obj/speclib.o obj/map2.o obj/turb.o obj/mvmesh.o obj/ic.o obj/gfldr.o obj/ssolv.o obj/planx.o obj/math.o obj/mxm_wrapper.o obj/hmholtz.o obj/gfdm_par.o obj/gfdm_op.o obj/gfdm_solve.o obj/subs1.o obj/subs2.o obj/genbox.o obj/gmres.o obj/hsmg.o obj/convect.o obj/induct.o obj/perturb.o obj/navier5.o obj/navier6.o obj/navier7.o obj/navier8.o obj/fast3d.o obj/fasts.o obj/calcz.o obj/byte.o obj/chelpers.o obj/byte_mpi.o obj/postpro.o obj/intp_usr.o obj/cvode_driver.o obj/nek_comm.o obj/vprops.o obj/makeq_aux.o obj/papi.o obj/nek_in_situ.o obj/readat_new.o obj/reader_re2.o obj/finiparser.o obj/iniparser.o obj/dictionary.o obj/mxm_std.o obj/comm_mpi.o obj/singlmesh.o obj/blas.o obj/dsygv.o -L/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/3rd_party/gslib/src -lgs 
obj/hemi.o: In function `particle_out_':
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/NekExamples/hemi/hemi.f:469:(.text+0x14f): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/NekExamples/hemi/hemi.f:470:(.text+0x16d): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/NekExamples/hemi/hemi.f:475:(.text+0x227): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
obj/drive2.o: In function `dofcnt_':
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/drive2.f:1585:(.text+0x9314): relocation truncated to fit: R_X86_64_PC32 against symbol `scrns_' defined in COMMON section in obj/convect.o
obj/plan4.o: In function `crespsp_':
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/plan4.f:237:(.text+0xc65): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/plan4.f:252:(.text+0xd18): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/plan4.f:263:(.text+0xdab): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/plan4.f:246:(.text+0x10fb): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
obj/bdry.o: In function `trst3d_':
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/bdry.f:1662:(.text+0x387): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
obj/coef.o: In function `area3_':
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/coef.f:1221:(.text+0x3ce): relocation truncated to fit: R_X86_64_32S against symbol `scrns_' defined in COMMON section in obj/convect.o
/sandbox/jenkins-ci/workspace/Nek5000/COMPILER/gnu/TEST_CASE/Hemi/Nek5000/core/coef.f:1221:(.text+0x3d5): additional relocation overflows omitted from the output
collect2: error: ld returned 1 exit status
make: *** [nek5000] Error 1
@stgeke
Copy link
Contributor

stgeke commented May 11, 2017 via email

@RonRahaman
Copy link
Contributor Author

Hmm, that's not what I see in Jenkins right now.

@stgeke
Copy link
Contributor

stgeke commented May 11, 2017

Fixed in the latest version. Now there is another problem:
FAILURE: wmax: Test value 0.48305 exceeds target value 0.47915 +/- 1e-06

@stgeke
Copy link
Contributor

stgeke commented May 18, 2017

@adampep Did you look into this?

@adampep
Copy link
Contributor

adampep commented May 19, 2017 via email

@stgeke
Copy link
Contributor

stgeke commented May 22, 2017

This Nek5000/Nek5000@91413dd improved the results. However it still fails:
FAILURE: wmax: Test value 0.47972 exceeds target value 0.47915 +/- 1e-06

The remaining difference is related to the changed plag initialization.
I recommend to change the target value to 0.47972.

@adampep
Copy link
Contributor

adampep commented May 26, 2017

I've finally found it. Caused by commit 9bf13ae, that corrects pressure in the second step. Like in ext_cyl the new value should be better than the last one. As Stefan last time increased delta, I will do the same this time

@stgeke
Copy link
Contributor

stgeke commented Jun 2, 2017

Fixed 648bde0

@stgeke stgeke closed this as completed Jun 2, 2017
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

3 participants