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How to run nextdenovo on lsf system #20

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zzlzef opened this issue Oct 25, 2019 · 1 comment
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How to run nextdenovo on lsf system #20

zzlzef opened this issue Oct 25, 2019 · 1 comment

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@zzlzef
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zzlzef commented Oct 25, 2019

job_type = lsf
i don't know how to set cluster_options
@moold
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moold commented Oct 25, 2019

I do not have a LSF system, but may be you can try use bsub --help to find options about defining cpu and memory of each job. NextDenovo will replace {vf}, {cpu}, {bash} in cluster_options with specific values needed for each jobs.

@moold moold closed this as completed Nov 4, 2019
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@moold @zzlzef