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Update .travis.yml
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nickcafferry committed Sep 18, 2020
1 parent 0ff288b commit 15e9466
Showing 1 changed file with 7 additions and 13 deletions.
20 changes: 7 additions & 13 deletions .travis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,17 +8,6 @@ python:

before_install:
- cd Machine-Learning-for-Structural-Bioinformatics/PSSpred/
- mkdir nr
- cd nr/
- wget -O nr.tar.gz https://zhanglab.ccmb.med.umich.edu/cgi-bin/download_ftp.cgi?ID=nr.tar.gz
- tar -zxvf nr.tar.gz
- ls
- pwd
- sudo apt-get update -qq
- wget https://zhanglab.ccmb.med.umich.edu/PSSpred/PSSpred_v4.tar.bz2
- tar -jxvf PSSpred_v4.tar.bz2
- ls
- pwd

before_install:
- sudo apt-get install liblapack-dev
Expand All @@ -40,10 +29,15 @@ install:
script:
- ls
- coverage debug sys
- coverage run conf.py
- coverage run pymbd/__init__.py
- codecov
- bash <(curl -s https://codecov.io/bash)
- cd Machine-Learning-for-Structural-Bioinformatics/PSSpred/nr/
- cd /home/travis/build/nickcafferry/Machine-Learning-in-Molecular-Sciences/Machine-Learning-for-Structural-Bioinformatics/PSSpred/
- mkdir nr
- cd nr/
- wget -O nr.tar.gz https://zhanglab.ccmb.med.umich.edu/cgi-bin/download_ftp.cgi?ID=nr.tar.gz
- tar -zxvf nr.tar.gz
- ls
- pwd
notifications:
email: false

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