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<span id="id1"></span><h1>General bibliography<a class="headerlink" href="#general-bibliography" title="Permalink to this headline">¶</a></h1>
<p>The references below are arranged alphabetically by first author. You can download the bib file <a class="reference download internal" download="" href="_downloads/33e59b5ca9ec342068223d604c3f8d55/references.bib"><code class="xref download docutils literal notranslate"><span class="pre">here</span></code></a>.</p>
<p id="id2"><ol class="arabic simple" start="1">
<li id="id3"><p>Elena Allen, Erik Erhardt, Eswar Damaraju, William Gruner, Judith Segall, Rogers Silva, Martin Havlicek, Srinivas Rachakonda, Jill Fries, Ravi Kalyanam, Andrew Michael, Arvind Caprihan, Jessica Turner, Tom Eichele, Steven Adelsheim, Angela Bryan, Juan Bustillo, Vincent Clark, Sarah Feldstein Ewing, Francesca Filbey, Corey Ford, Kent Hutchison, Rex Jung, Kent Kiehl, Piyadasa Kodituwakku, Yuko Komesu, Andrew Mayer, Godfrey Pearlson, John Phillips, Joseph Sadek, Michael Stevens, Ursina Teuscher, Robert Thoma, and Vince Calhoun. A baseline for the multivariate comparison of resting-state networks. <em>Frontiers in Systems Neuroscience</em>, 5:2, 2011. URL: <a class="reference external" href="https://www.frontiersin.org/article/10.3389/fnsys.2011.00002">https://www.frontiersin.org/article/10.3389/fnsys.2011.00002</a>, <a class="reference external" href="https://doi.org/10.3389/fnsys.2011.00002">doi:10.3389/fnsys.2011.00002</a>.</p></li>
<li id="id4"><p>Luca Baldassarre, Janaina Mourao-Miranda, and Massimiliano Pontil. Structured sparsity models for brain decoding from fmri data. In <em>2012 Second International Workshop on Pattern Recognition in NeuroImaging</em>, volume, 5–8. 2012. URL: <a class="reference external" href="http://www0.cs.ucl.ac.uk/staff/M.Pontil/reading/neurosparse_prni.pdf">http://www0.cs.ucl.ac.uk/staff/M.Pontil/reading/neurosparse_prni.pdf</a>, <a class="reference external" href="https://doi.org/10.1109/PRNI.2012.31">doi:10.1109/PRNI.2012.31</a>.</p></li>
<li id="id5"><p>Yashar Behzadi, Khaled Restom, Joy Liau, and Thomas T. Liu. A component based noise correction method (compcor) for bold and perfusion based fmri. <em>NeuroImage</em>, 37(1):90–101, 2007. URL: <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S1053811907003837">https://www.sciencedirect.com/science/article/pii/S1053811907003837</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1016/j.neuroimage.2007.04.042">doi:https://doi.org/10.1016/j.neuroimage.2007.04.042</a>.</p></li>
<li id="id6"><p>Pierre Bellec. Mining the hierarchy of resting-state brain networks: selection of representative clusters in a multiscale structure. In <em>2013 International Workshop on Pattern Recognition in Neuroimaging</em>, volume, 54–57. 06 2013. <a class="reference external" href="https://doi.org/10.1109/PRNI.2013.23">doi:10.1109/PRNI.2013.23</a>.</p></li>
<li id="id7"><p>Pierre Bellec, Pedro Rosa-Neto, Oliver C. Lyttelton, Habib Benali, and Alan C. Evans. Multi-level bootstrap analysis of stable clusters in resting-state fmri. <em>NeuroImage</em>, 51(3):1126–1139, 2010. URL: <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S1053811910002697">https://www.sciencedirect.com/science/article/pii/S1053811910002697</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1016/j.neuroimage.2010.02.082">doi:https://doi.org/10.1016/j.neuroimage.2010.02.082</a>.</p></li>
<li id="id8"><p>Alex Clarke and Lorraine K. Tyler. Object-specific semantic coding in human perirhinal cortex. <em>Journal of Neuroscience</em>, 34(14):4766–4775, 2014. URL: <a class="reference external" href="https://www.jneurosci.org/content/34/14/4766">https://www.jneurosci.org/content/34/14/4766</a>, <a class="reference external" href="https://arxiv.org/abs/https://www.jneurosci.org/content/34/14/4766.full.pdf">arXiv:https://www.jneurosci.org/content/34/14/4766.full.pdf</a>, <a class="reference external" href="https://doi.org/10.1523/JNEUROSCI.2828-13.2014">doi:10.1523/JNEUROSCI.2828-13.2014</a>.</p></li>
<li id="id9"><p>D. Louis Collins, Alex P. Zijdenbos, Wim F. C. Baaré, and Alan C. Evans. Animal+insect: improved cortical structure segmentation. In Attila Kuba, Martin Šáamal, and Andrew Todd-Pokropek, editors, <em>Information Processing in Medical Imaging</em>, 210–223. Berlin, Heidelberg, 1999. Springer Berlin Heidelberg.</p></li>
<li id="id10"><p>R. Cameron Craddock, G.Andrew James, Paul E. Holtzheimer III, Xiaoping P. Hu, and Helen S. Mayberg. A whole brain fmri atlas generated via spatially constrained spectral clustering. <em>Human Brain Mapping</em>, 33(8):1914–1928, 2012. URL: <a class="reference external" href="https://onlinelibrary.wiley.com/doi/abs/10.1002/hbm.21333">https://onlinelibrary.wiley.com/doi/abs/10.1002/hbm.21333</a>, <a class="reference external" href="https://arxiv.org/abs/https://onlinelibrary.wiley.com/doi/pdf/10.1002/hbm.21333">arXiv:https://onlinelibrary.wiley.com/doi/pdf/10.1002/hbm.21333</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1002/hbm.21333">doi:https://doi.org/10.1002/hbm.21333</a>.</p></li>
<li id="id14"><p>Kamalaker Dadi, Gaël Varoquaux, Antonia Machlouzarides-Shalit, Krzysztof J. Gorgolewski, Demian Wassermann, Bertrand Thirion, and Arthur Mensch. Fine-grain atlases of functional modes for fmri analysis. <em>NeuroImage</em>, 221:117126, 2020. URL: <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S1053811920306121">https://www.sciencedirect.com/science/article/pii/S1053811920306121</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1016/j.neuroimage.2020.117126">doi:https://doi.org/10.1016/j.neuroimage.2020.117126</a>.</p></li>
<li id="id21"><p>C Destrieux, B Fischl, AM Dale, and E Halgren. A sulcal depth-based anatomical parcellation of the cerebral cortex. <em>NeuroImage</em>, 47(Supplement 1):S151, 2009. <a class="reference external" href="https://doi.org/10.1016/S1053-8119(09)71561-7">doi:10.1016/S1053-8119(09)71561-7</a>.</p></li>
<li id="id22"><p>Christophe Destrieux, Bruce Fischl, Anders Dale, and Eric Halgren. Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature. <em>NeuroImage</em>, 53(1):1–15, 2010. URL: <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S1053811910008542">https://www.sciencedirect.com/science/article/pii/S1053811910008542</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1016/j.neuroimage.2010.06.010">doi:https://doi.org/10.1016/j.neuroimage.2010.06.010</a>.</p></li>
<li id="id11"><p>Elvis Dohmatob, Michael Eickenberg, Bertrand Thirion, and Gaël Varoquaux. Speeding-up model-selection in GraphNet via early-stopping and univariate feature-screening. In <em>PRNI</em>. Stanford, United States, June 2015. URL: <a class="reference external" href="https://hal.inria.fr/hal-01147731">https://hal.inria.fr/hal-01147731</a>.</p></li>
<li id="id12"><p>Elvis Dohmatob, Alexandre Gramfort, Bertrand Thirion, and Gaël Varoquaux. Benchmarking solvers for TV-l1 least-squares and logistic regression in brain imaging. In <em>PRNI 2014 - 4th International Workshop on Pattern Recognition in NeuroImaging</em>. Tübingen, Germany, June 2014. IEEE. URL: <a class="reference external" href="https://hal.inria.fr/hal-00991743">https://hal.inria.fr/hal-00991743</a>.</p></li>
<li id="id13"><p>Nico U. F. Dosenbach, Binyam Nardos, Alexander L. Cohen, Damien A. Fair, Jonathan D. Power, Jessica A. Church, Steven M. Nelson, Gagan S. Wig, Alecia C. Vogel, Christina N. Lessov-Schlaggar, Kelly Anne Barnes, Joseph W. Dubis, Eric Feczko, Rebecca S. Coalson, John R. Pruett, Deanna M. Barch, Steven E. Petersen, and Bradley L. Schlaggar. Prediction of individual brain maturity using fmri. <em>Science</em>, 329(5997):1358–1361, 2010. URL: <a class="reference external" href="https://science.sciencemag.org/content/329/5997/1358">https://science.sciencemag.org/content/329/5997/1358</a>, <a class="reference external" href="https://arxiv.org/abs/https://science.sciencemag.org/content/329/5997/1358.full.pdf">arXiv:https://science.sciencemag.org/content/329/5997/1358.full.pdf</a>, <a class="reference external" href="https://doi.org/10.1126/science.1194144">doi:10.1126/science.1194144</a>.</p></li>
<li id="id15"><p>John Duchi, Stephen Gould, and Daphne Koller. Projected subgradient methods for learning sparse gaussians. <em>arXiv:1206.3249 [cs, stat]</em>, 06 2012. URL: <a class="reference external" href="https://arxiv.org/abs/1206.3249">https://arxiv.org/abs/1206.3249</a>, <a class="reference external" href="https://arxiv.org/abs/1206.3249">arXiv:1206.3249</a>.</p></li>
<li id="id16"><p>Joset A. Etzel, Jeffrey M. Zacks, and Todd S. Braver. Searchlight analysis: promise, pitfalls, and potential. <em>NeuroImage</em>, 78:261–269, 2013. URL: <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S1053811913002917">https://www.sciencedirect.com/science/article/pii/S1053811913002917</a>, <a class="reference external" href="https://doi.org/https://doi.org/10.1016/j.neuroimage.2013.03.041">doi:https://doi.org/10.1016/j.neuroimage.2013.03.041</a>.</p></li>
<li id="id23"><p>Nicola Filippini, Bradley J. MacIntosh, Morgan G. Hough, Guy M. Goodwin, Giovanni B. Frisoni, Stephen M. Smith, Paul M. Matthews, Christian F. Beckmann, and Clare E. Mackay. Distinct patterns of brain activity in young carriers of the apoe-ε4 allele. <em>Proceedings of the National Academy of Sciences</em>, 106(17):7209–7214, 2009. URL: <a class="reference external" href="https://www.pnas.org/content/106/17/7209">https://www.pnas.org/content/106/17/7209</a>, <a class="reference external" href="https://arxiv.org/abs/https://www.pnas.org/content/106/17/7209.full.pdf">arXiv:https://www.pnas.org/content/106/17/7209.full.pdf</a>, <a class="reference external" href="https://doi.org/10.1073/pnas.0811879106">doi:10.1073/pnas.0811879106</a>.</p></li>
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