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Some updates in Horizon fixing some issues for upcoming release #1924

Merged
merged 55 commits into from Aug 5, 2019
Merged

Some updates in Horizon fixing some issues for upcoming release #1924

merged 55 commits into from Aug 5, 2019

Commits on May 23, 2019

  1. NF: support for 4D image visualization

    @Garyfallidis
    Garyfallidis committed May 23, 2019
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  2. Minor update still need to update x and y slides correctly

    @Garyfallidis
    Garyfallidis committed May 23, 2019
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Commits on May 24, 2019

  1. 4D volume rendering works

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  2. NF: Adding timer callback

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  3. Panel takes iren as additional input

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  4. Updated slicer_panel with change

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  5. Calculating percentiles only for 1st volumes of 4D images

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  6. Updates in info workflow logging

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  7. ENH: update size of header automatically

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  8. Picking does not work on x and y in 3d volumes but works on 4d volumes

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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  9. Started changing handle colors but picking 3D still needs care

    @Garyfallidis
    Garyfallidis committed May 24, 2019
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Commits on May 25, 2019

  1. Slider color changed and picking seems working both in 3d and 4d

    @Garyfallidis
    Garyfallidis committed May 25, 2019
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Commits on May 26, 2019

  1. Slicers can appear and disappear

    @Garyfallidis
    Garyfallidis committed May 26, 2019
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Commits on May 28, 2019

  1. NF: added peaks loading in Horizon

    @Garyfallidis
    Garyfallidis committed May 28, 2019
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  2. Peak directions are visible. However some speedup is required

    @Garyfallidis
    Garyfallidis committed May 28, 2019
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  3. Minor change

    @Garyfallidis
    Garyfallidis committed May 28, 2019
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  4. Added experimental callback to peak_slicer

    @Garyfallidis
    Garyfallidis committed May 28, 2019
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  5. BF: datasets with affines with negative values along the diagonal had… 

    … issues in giving the right data information. Should be now resolved. More tests needed concerning peaks
    @Garyfallidis
    Garyfallidis committed May 28, 2019
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Commits on May 30, 2019

  1. BF: dec fa visible after correction and volume slider should be disabled

    @Garyfallidis
    Garyfallidis committed May 30, 2019
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  2. Show values of rgb voxels

    @Garyfallidis
    Garyfallidis committed May 30, 2019
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Commits on Jun 3, 2019

  1. Trying different ways to speed up computations across 4D volumes

    @Garyfallidis
    Garyfallidis committed Jun 3, 2019
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  2. Continuing working on speeding up some of the slicing operations

    @Garyfallidis
    Garyfallidis committed Jun 3, 2019
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Commits on Jun 5, 2019

  1. Adding double slider

    @Garyfallidis
    Garyfallidis committed Jun 5, 2019
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  2. Using simple line slider for now

    @Garyfallidis
    Garyfallidis committed Jun 5, 2019
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Commits on Jun 6, 2019

  1. Okay new workaround for double slider

    @Garyfallidis
    Garyfallidis committed Jun 6, 2019
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  2. Cleaning some code in panel.py

    @Garyfallidis
    Garyfallidis committed Jun 6, 2019
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  3. NF: use any colormap while slicing

    @Garyfallidis
    Garyfallidis committed Jun 6, 2019
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Commits on Jun 16, 2019

  1. Switching to a global memory system so that the different panels and … 

    …actors can communicate
    @Garyfallidis
    Garyfallidis committed Jun 16, 2019
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Commits on Jun 17, 2019

  1. ENH: increasing number of global memory attributes

    @Garyfallidis
    Garyfallidis committed Jun 17, 2019
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  2. NF: switch horizon to global memory management

    @Garyfallidis
    Garyfallidis committed Jun 17, 2019
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Commits on Jun 18, 2019

  1. BF: more corrections with the change of memory management

    @Garyfallidis
    Garyfallidis committed Jun 18, 2019
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Commits on Jun 20, 2019

  1. Added remove and add_actors methods

    @Garyfallidis
    Garyfallidis committed Jun 20, 2019
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Commits on Jul 8, 2019

  1. Updated gmem and panel with clickable colormap change

    @Garyfallidis
    Garyfallidis committed Jul 8, 2019
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Commits on Jul 25, 2019

  1. Small fix for printing statements and trailing spaces

    @Garyfallidis
    Garyfallidis committed Jul 25, 2019
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Commits on Jul 26, 2019

  1. Switched get_numpy to resliced_array function

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  2. Merge branch 'master' into horizon_updates_a

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  3. Removed a few line breaks

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  4. Merge branch 'horizon_updates_a' of github.com:Garyfallidis/dipy into… 

    … horizon_updates_a
    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  5. Changed has to have

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  6. Pep 8 corrections for app.py

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  7. Pep 8 corrections for gmem.py

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  8. Pep 8 for panel.py

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  9. Pep 8 for io.py

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  10. Pep 8 for viz.py

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  11. A bit more pep8ing

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  12. More stylistic changes

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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  13. Little space removed

    @Garyfallidis
    Garyfallidis committed Jul 26, 2019
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Commits on Jul 31, 2019

  1. Increasing coverage for Horizon

    @Garyfallidis
    Garyfallidis committed Jul 31, 2019
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Commits on Aug 1, 2019

  1. ENH: added event recording option

    @Garyfallidis
    Garyfallidis committed Aug 1, 2019
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  2. Raise Error when streamlines are shown in native coords

    @Garyfallidis
    Garyfallidis committed Aug 1, 2019
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  3. Updated tests and uploaded logs for event recordings

    @Garyfallidis
    Garyfallidis committed Aug 1, 2019
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Commits on Aug 2, 2019

  1. Recorded new event files

    @Garyfallidis
    Garyfallidis committed Aug 2, 2019
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  2. RF: HORIZON to HORIMEM

    @Garyfallidis
    Garyfallidis committed Aug 2, 2019
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Commits on Aug 5, 2019

  1. Skipping tests that create Xserver error (xvfb) 

    With and only with xvfb and mesa XIO errors are created.
Needs more work to identify the reason.
Nonetheless application works successfully in all 3 major operating
systems. Automating the testing procedure for horizon using
recorded events still needs more work.
    @Garyfallidis
    Garyfallidis committed Aug 5, 2019
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  2. Fix with skip = True

    @Garyfallidis
    Garyfallidis committed Aug 5, 2019
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