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I am trying to use CoNIFER but I have the following bug when running conifer.py:
Traceback (most recent call last):
File "conifer.py", line 682, in
args.func(args)
File "conifer.py", line 545, in CF_bam2RPKM
probes = cf.loadProbeList(probe_fn)
File "conifer_functions.py", line 96, in loadProbeList
probes.append({'probeID': probeID, 'chr':chrStr2Int(row['chr']),'start':int(row['start']),'stop':int(row['stop']), 'name':row['name']})
KeyError: 'stop'
The text was updated successfully, but these errors were encountered:
Dear Nik,
I am trying to use CoNIFER but I have the following bug when running conifer.py:
Traceback (most recent call last):
File "conifer.py", line 682, in
args.func(args)
File "conifer.py", line 545, in CF_bam2RPKM
probes = cf.loadProbeList(probe_fn)
File "conifer_functions.py", line 96, in loadProbeList
probes.append({'probeID': probeID, 'chr':chrStr2Int(row['chr']),'start':int(row['start']),'stop':int(row['stop']), 'name':row['name']})
KeyError: 'stop'
The text was updated successfully, but these errors were encountered: