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document new reported autocorrelation feature #17
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too much detail for the manual, so no additions. |
I got a question from @zandjyo (Steve Barbeaux) who was looking for a reference about the reported est_rho and Durbin-Watson statistics included in some of the SS3 output. We previously concluded that the manual didn't need to go into the weeds on this stuff, and I see that @k-doering-NOAA checked that the values match the results of existing R functions in nmfs-ost/ss3-source-code#65 (comment), but perhaps it's worth adding a sentence to the recruitment and time-varying parameters sections of the manual that says something like "The lag-1 autocorrelation and Durbin-Watson statistics are reported in the 'est_rho' and 'Durbin-Watson' columns" ("D-W" in the case of time-varying parameters). We could also add the references to these papers which I found via https://en.wikipedia.org/wiki/Durbin%E2%80%93Watson_statistic: |
comment from @RickMethot on 2020-09-21:
In Spawn-Recruit, output is:
ERA N RMSE RMSE^2/sigmaR^2 mean_BiasAdj est_rho Durbin-Watson
main 51 0.499639 0.693441 1 0.117993 1.75467
early 10 0.362451 0.364919 1
In parm_dev_details:
Parm_devs_detail report:4
Index Phase MinYr MaxYr N stddev Rho Like_devs Like_se mean rmse var sqrt(var) est_rho D-W
1 4 1972 2021 50 13 0 0.110312 0 0.0465018 0.0664264 0.00225005 0.0474347 0.0221286 1.95646
2 4 1972 2021 50 13 0 0.0291132 0 0.00423782 0.0341252 0.00114657 0.033861 0.159893 1.67088
Originally posted by @k-doering-NOAA in nmfs-ost/ss3-source-code#65 (comment)
See nmfs-ost/ss3-source-code#65 for full thread on feature
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