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DirectPropertyManagerTest.py
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DirectPropertyManagerTest.py
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# Mantid Repository : https://github.com/mantidproject/mantid
#
# Copyright © 2018 ISIS Rutherford Appleton Laboratory UKRI,
# NScD Oak Ridge National Laboratory, European Spallation Source,
# Institut Laue - Langevin & CSNS, Institute of High Energy Physics, CAS
# SPDX - License - Identifier: GPL - 3.0 +
import unittest
from sys import platform
import numpy as np
from Direct.AbsorptionShapes import *
from Direct.PropertyManager import PropertyManager
from mantid import api
from mantid.simpleapi import *
# -----------------------------------------------------------------------------------------------------------------------------------------
# -----------------------------------------------------------------------------------------------------------------------------------------
# -----------------------------------------------------------------------------------------------------------------------------------------
# -----------------------------------------------------------------------------------------------------------------------------------------
class DirectPropertyManagerTest(unittest.TestCase):
def __init__(self, methodName):
self.prop_man = PropertyManager("MAR")
return super(DirectPropertyManagerTest, self).__init__(methodName)
def setUp(self):
if self.prop_man is None or type(self.prop_man) != type(PropertyManager):
self.prop_man = PropertyManager("MAR")
def tearDown(self):
pass
@staticmethod
def getInstrument(InstrumentName='MAR'):
""" test method used to obtain default instrument for testing """
idf_file = api.ExperimentInfo.getInstrumentFilename(InstrumentName)
tmp_ws_name = '__empty_' + InstrumentName
if not mtd.doesExist(tmp_ws_name):
LoadEmptyInstrument(Filename=idf_file, OutputWorkspace=tmp_ws_name)
return mtd[tmp_ws_name].getInstrument()
def test_init_reducer(self):
propman = self.prop_man
self.assertEqual(propman.deltaE_mode, 'direct')
self.assertRaises(KeyError, getattr, propman, 'non_existing_property')
def test_set_non_default_wrong_value(self):
propman = self.prop_man
# should do nothing as already initialized above
# non-existing property can not be set!
self.assertRaises(KeyError, setattr, propman, 'non_existing_property', "Something_Meaningfull")
# existing simple assignment works
propman.load_monitors_with_workspace = False
propman.load_monitors_with_workspace = True
self.assertTrue(propman.load_monitors_with_workspace)
def test_set_non_default_simple_value(self):
propman = self.prop_man
self.assertEqual(len(propman.getChangedProperties()), 0)
propman.van_mass = 100
self.assertAlmostEqual(propman.van_sig, 0., 7)
propman.diag_van_sig = 1
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 2)
self.assertTrue('van_mass' in prop_changed)
self.assertTrue('van_sig' in prop_changed)
def test_overloaded_setters_getters(self):
propman = self.prop_man
changed_properties = propman.getChangedProperties()
self.assertEqual(len(changed_properties), 0)
self.assertAlmostEqual(propman.van_rmm, 50.9415, 9)
self.assertRaises(AttributeError, setattr, propman, 'van_rmm', 100)
self.assertEqual(propman.det_cal_file, None)
propman.det_cal_file = 'a_data_file.dat'
self.assertEqual(propman.det_cal_file, 'a_data_file.dat')
self.assertNotEqual(propman.map_file, None, 'it is defined in IDF')
propman.map_file = 'a_map_file'
self.assertEqual(propman.map_file, 'a_map_file.map')
self.assertFalse(propman.monovan_mapfile is None, " Monovan map file by default is defined")
propman.monovan_mapfile = 'a_monovan_map_file'
self.assertEqual(propman.monovan_mapfile, 'a_monovan_map_file.map')
propman.monovan_mapfile = 'the_monovan_map_file.rst'
self.assertEqual(propman.monovan_mapfile, 'the_monovan_map_file.rst')
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 3)
self.assertTrue('det_cal_file' in prop_changed)
self.assertTrue('map_file' in prop_changed)
self.assertTrue('monovan_mapfile' in prop_changed)
def test_hartmask_plus_or_only(self):
propman = self.prop_man
self.assertEqual(propman.hard_mask_file, None)
propman.hard_mask_file = 'a_mask_file'
self.assertEqual(propman.hard_mask_file, 'a_mask_file.msk')
prop_changed = propman.getChangedProperties()
self.assertTrue('hard_mask_file' in prop_changed)
def test_set_spectra_to_mon(self):
propman = self.prop_man
self.assertEqual(propman.spectra_to_monitors_list, None)
propman.spectra_to_monitors_list = 35
self.assertTrue(isinstance(propman.spectra_to_monitors_list, list))
self.assertEqual(35, propman.spectra_to_monitors_list[0])
propman.spectra_to_monitors_list = None
self.assertEqual(propman.spectra_to_monitors_list, None)
propman.spectra_to_monitors_list = 'None'
self.assertEqual(propman.spectra_to_monitors_list, None)
propman.spectra_to_monitors_list = []
self.assertEqual(propman.spectra_to_monitors_list, None)
propman.spectra_to_monitors_list = '467'
self.assertEqual(467, propman.spectra_to_monitors_list[0])
propman.spectra_to_monitors_list = '467,444'
self.assertEqual(467, propman.spectra_to_monitors_list[0])
self.assertEqual(444, propman.spectra_to_monitors_list[1])
propman.spectra_to_monitors_list = ['467', '444']
self.assertEqual(467, propman.spectra_to_monitors_list[0])
self.assertEqual(444, propman.spectra_to_monitors_list[1])
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 1)
self.assertTrue('spectra_to_monitors_list' in prop_changed)
def test_set_non_default_complex_value(self):
propman = self.prop_man
range = propman.norm_mon_integration_range
self.assertAlmostEqual(range[0], 1000., 7,
" Default integration min range on MARI should be as described in MARI_Parameters.xml "
"file")
self.assertAlmostEqual(range[1], 2000., 7,
" Default integration max range on MAPS should be as described in MARI_Parameters.xml "
"file")
self.assertEqual(propman.ei_mon_spectra, (2, 3),
" Default ei monitors on MARI should be as described in MARI_Parameters.xml file")
propman.norm_mon_integration_range = [50, 1050]
range = propman.norm_mon_integration_range
self.assertAlmostEqual(range[0], 50., 7)
self.assertAlmostEqual(range[1], 1050., 7)
propman.ei_mon1_spec = 10
mon_spectra = propman.ei_mon_spectra
self.assertEqual(mon_spectra, (10, 3))
self.assertEqual(propman.ei_mon1_spec, 10)
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 2)
self.assertTrue('norm_mon_integration_range' in prop_changed)
self.assertTrue("norm_mon_integration_range" in prop_changed, "mon_norm_range should change")
self.assertTrue("ei-mon1-spec" in prop_changed, "changing ei_mon_spectra should change ei-mon1-spec")
def test_set_non_default_complex_value_synonims(self):
propman = PropertyManager("MAP")
propman.test_ei2_mon_spectra = 10000
self.assertEqual(propman.ei_mon_spectra, (41475, 10000))
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 1)
self.assertTrue("ei-mon2-spec" in prop_changed, "changing test_ei2_mon_spectra should change ei-mon2-spectra")
propman.test_mon_spectra_composite = [10000, 2000]
self.assertEqual(propman.ei_mon_spectra, (10000, 2000))
prop_changed = propman.getChangedProperties()
self.assertEqual(len(prop_changed), 2)
self.assertTrue("ei_mon_spectra" in prop_changed,
"changing test_mon_spectra_composite should change ei_mon_spectra")
## weird way to prohibit this assignment
# But it works and I was not able to find any other way!
try:
propman.ei_mon_spectra[1] = 100
Success = True
except TypeError:
Success = False
self.assertFalse(Success)
self.assertEqual(10000, propman.ei_mon_spectra[0])
self.assertEqual(2000, propman.ei_mon_spectra[1])
# This works as should
propman.ei_mon_spectra = (100, 200)
self.assertEqual(100, propman.ei_mon_spectra[0])
self.assertEqual(200, propman.ei_mon_spectra[1])
def test_set_get_mono_range(self):
# TODO : A lot of changes and tests here for mono_range
propman = self.prop_man
energy_incident = 100
propman.incident_energy = energy_incident
hi_frac = propman.monovan_hi_frac
lo_frac = propman.monovan_lo_frac
# propman.monovan_integr_range = None
self.assertEqual(propman.monovan_integr_range, [lo_frac * energy_incident, hi_frac * energy_incident])
def test_load_monitors_with_workspace(self):
propman = self.prop_man
self.assertTrue(propman.load_monitors_with_workspace, 'MARI loads monitors with workspace by default')
propman.load_monitors_with_workspace = True
self.assertTrue(propman.load_monitors_with_workspace)
propman.load_monitors_with_workspace = 0
self.assertFalse(propman.load_monitors_with_workspace)
propman.load_monitors_with_workspace = 10
self.assertTrue(propman.load_monitors_with_workspace)
def test_get_default_parameter_val(self):
propman = self.prop_man
param = propman.getDefaultParameterValue('map_file')
self.assertTrue(isinstance(param, str))
param = propman.getDefaultParameterValue('ei-mon1-spec')
self.assertTrue(isinstance(param, int))
param = propman.getDefaultParameterValue('check_background')
self.assertTrue(isinstance(param, bool))
def test_save_format(self):
propman = self.prop_man
formats = propman.save_format
self.assertEqual(len(formats), 0)
propman.save_format = 'unknown'
self.assertEqual(len(propman.save_format), 0)
propman.save_format = '.spe'
formats = propman.save_format
self.assertTrue('spe' in formats)
propman.save_format = 'nxspe'
formats = propman.save_format
self.assertTrue('spe' in formats)
self.assertTrue('nxspe' in formats)
propman.save_format = ''
self.assertEqual(len(propman.save_format), 0)
propman.save_format = ['nxspe', '.nxs']
formats = propman.save_format
self.assertTrue('nxs' in formats)
self.assertTrue('nxspe' in formats)
propman.save_format = None
self.assertEqual(len(propman.save_format), 0)
propman.save_format = 'spe,.nxs'
formats = propman.save_format
self.assertEqual(len(propman.save_format), 2)
self.assertTrue('nxs' in formats)
self.assertTrue('spe' in formats)
propman.save_format = '(spe,nxspe)'
self.assertEqual(len(propman.save_format), 3)
propman.save_format = 'None'
self.assertEqual(len(propman.save_format), 0)
propman.save_format = ('spe', 'nxspe')
self.assertEqual(len(propman.save_format), 2)
self.assertTrue('nxspe' in formats)
self.assertTrue('spe' in formats)
def test_allowed_values(self):
propman = self.prop_man
nm = propman.normalise_method
self.assertEqual(nm, 'monitor-1')
propman.normalise_method = None
self.assertEqual(propman.normalise_method, None)
propman.normalise_method = 'monitor-2'
self.assertEqual(propman.normalise_method, 'monitor-2')
propman.normalise_method = 'current'
self.assertEqual(propman.normalise_method, 'current')
self.assertRaises(KeyError, setattr, propman, 'normalise_method', 'unsupported')
# Only direct method is supported
self.assertEqual(propman.deltaE_mode, 'direct')
self.assertRaises(KeyError, setattr, propman, 'deltaE_mode', 'unsupported')
def test_ki_kf(self):
propman = self.prop_man
self.assertTrue(propman.apply_kikf_correction)
propman.apply_kikf_correction = True
self.assertTrue(propman.apply_kikf_correction)
propman.apply_kikf_correction = False
self.assertFalse(propman.apply_kikf_correction)
def test_instr_name_and_psi(self):
propman = self.prop_man
psi = propman.psi
self.assertTrue(np.isnan(psi))
instr_name = propman.instr_name
self.assertEqual(instr_name, 'MARI')
propman.psi = 10
self.assertEqual(propman.psi, 10)
logs = propman.motor_log_names
self.assertTrue(isinstance(logs, list))
self.assertEqual(len(logs), 2)
self.assertEqual(logs[0], 'wccr')
self.assertEqual(logs[1], 'Rot')
self.assertEqual(propman.motor_offset, None)
sample_ws = CreateSampleWorkspace(Function='Multiple Peaks', NumBanks=4, BankPixelWidth=1,
NumEvents=10, XUnit='Energy', XMin=3, XMax=200, BinWidth=0.1)
propman.motor_offset = 10
psi = PropertyManager.psi.read_psi_from_workspace(sample_ws)
self.assertTrue(np.isnan(psi))
AddSampleLog(Workspace=sample_ws, LogName='Rot', LogText='20.', LogType='Number Series')
propman.motor_offset = None
psi = PropertyManager.psi.read_psi_from_workspace(sample_ws)
self.assertTrue(np.isnan(psi))
propman.psi = sample_ws
self.assertTrue(np.isnan(propman.psi))
propman.motor_offset = 10
self.assertEqual(propman.motor_offset, 10)
self.assertAlmostEqual(propman.psi, 30.)
psi = PropertyManager.psi.read_psi_from_workspace(sample_ws)
self.assertAlmostEqual(psi, 30.)
AddSampleLog(Workspace=sample_ws, LogName='CCR_ROT', LogText='50.', LogType='Number Series')
propman.motor_log_names = 'Some_log'
logs = propman.motor_log_names
self.assertTrue(isinstance(logs, list))
self.assertEqual(len(logs), 1)
self.assertEqual(logs[0], 'Some_log')
self.assertTrue(np.isnan(propman.psi))
propman.motor_log_names = 'CCR_ROT'
self.assertAlmostEqual(propman.psi, 60.)
psi = PropertyManager.psi.read_psi_from_workspace(sample_ws)
self.assertAlmostEqual(psi, 60.)
api.AnalysisDataService.clear()
def test_diag_spectra(self):
propman = self.prop_man
self.assertEqual(propman.diag_spectra, None)
propman.diag_spectra = '(19,299);(399,500)'
spectra = propman.diag_spectra
self.assertEqual(spectra[0], (19, 299))
self.assertEqual(spectra[1], (399, 500))
propman = PropertyManager("MAP")
spectra = propman.diag_spectra
# (1,17280);(17281,18432);(18433,32256);(32257,41472)
self.assertEqual(len(spectra), 4)
self.assertEqual(spectra[0], (1, 17280))
self.assertEqual(spectra[3], (32257, 41472))
def test_get_diagnostics_parameters(self):
propman = self.prop_man
params = propman.get_diagnostics_parameters()
self.assertEqual(len(params), 21)
bkg_test_range0 = propman.background_test_range
bkg_test_range = params['background_test_range']
bkg_range = propman.background_range
self.assertEqual(bkg_range, bkg_test_range)
self.assertEqual(bkg_range, bkg_test_range0)
propman.background_test_range = [1000, 2000]
bkg_test_range = propman.background_test_range
self.assertEqual(bkg_test_range, (1000., 2000.))
def test_check_monovan_changed(self):
propman = self.prop_man
non_changed = propman._check_monovan_par_changed()
# nothing have changed initially
self.assertEqual(len(non_changed), 2)
propman.monovan_run = 102
propman.log_changed_values()
propman.sample_mass = 1
non_changed = propman._check_monovan_par_changed()
self.assertEqual(len(non_changed), 1)
propman.sample_rmm = 200
non_changed = propman._check_monovan_par_changed()
self.assertEqual(len(non_changed), 0)
propman.log_changed_values()
def test_set_defaults_from_instrument(self):
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=100)
SetInstrumentParameter(ws, ParameterName="TestParam1", Value="3.5", ParameterType="Number")
SetInstrumentParameter(ws, ParameterName="TestParam2", Value="initial1", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="TestParam3", Value="initial2", ParameterType="String")
instr = ws.getInstrument()
propman = PropertyManager(instr)
self.assertAlmostEqual(propman.TestParam1, 3.5)
self.assertEqual(propman.TestParam2, "initial1")
self.assertEqual(propman.TestParam3, "initial2")
propman.TestParam2 = "gui_changed1"
self.assertEqual(propman.TestParam2, "gui_changed1")
SetInstrumentParameter(ws, ParameterName="TestParam2", Value="instr_changed1", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="TestParam3", Value="instr_changed2", ParameterType="String")
self.assertAlmostEqual(propman.TestParam1, 3.5)
self.assertEqual(propman.TestParam2, "gui_changed1")
self.assertEqual(propman.TestParam3, "initial2")
changes = propman.getChangedProperties()
self.assertTrue('TestParam2' in changes)
self.assertTrue(not ('TestParam3' in changes))
changes = propman.update_defaults_from_instrument(ws.getInstrument())
self.assertAlmostEqual(propman.TestParam1, 3.5)
self.assertEqual(propman.TestParam2, "gui_changed1")
self.assertEqual(propman.TestParam3, "instr_changed2")
self.assertTrue('TestParam2' in changes)
self.assertTrue('TestParam3' in changes)
def test_set_complex_defaults_from_instrument(self):
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=10)
SetInstrumentParameter(ws, ParameterName="Param1", Value="BaseParam1:BaseParam2", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="BaseParam1", Value="Val1", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="BaseParam2", Value="Val2", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="synonims", Value="ParaPara=BaseParam2", ParameterType="String")
instr = ws.getInstrument()
propman = PropertyManager(instr)
SampleResult = ['Val1', 'Val2']
cVal = propman.Param1
for test, sample in zip(cVal, SampleResult):
self.assertEqual(test, sample)
self.assertEqual(propman.ParaPara, 'Val2')
self.assertEqual(propman.BaseParam2, 'Val2')
propman.sample_run = ws
# assume we get workspace with different instrument parameters
SetInstrumentParameter(ws, ParameterName="Param1", Value="addParam1:addParam2", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="BaseParam1", Value="OtherVal1", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="BaseParam2", Value="OtherVal2", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="addParam1", Value="Ignore1", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="addParam2", Value="Ignore2", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="mask_run", Value="None", ParameterType="String")
changed_prop = propman.update_defaults_from_instrument(ws.getInstrument())
self.assertEqual(len(changed_prop), 4)
# property have been changed from GUI and changes from instrument are
# ignored
SampleResult = ['OtherVal1', 'OtherVal2']
cVal = propman.Param1
for test, sample in zip(cVal, SampleResult):
self.assertEqual(test, sample)
self.assertEqual(propman.ParaPara, 'OtherVal2')
self.assertEqual(propman.BaseParam2, 'OtherVal2')
self.assertEqual(propman.BaseParam1, "OtherVal1")
def test_set_all_defaults_from_instrument(self):
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=10)
# idf_dir = config.getString('instrumentDefinition.directory')
idf_file = api.ExperimentInfo.getInstrumentFilename('LET', '2014-05-03 23:59:59')
ws = LoadEmptyInstrument(Filename=idf_file, OutputWorkspace=ws)
# Propman was defined for MARI but reduction parameters are all the
# same, so testing on LET
propman = self.prop_man
self.assertEqual(propman.ei_mon1_spec, 2)
ws = mtd['ws']
changed_prop = propman.update_defaults_from_instrument(ws.getInstrument(), False)
self.assertTrue('ei-mon1-spec' in changed_prop)
self.assertEqual(propman.ei_mon1_spec, 65542)
self.assertFalse('ei_mon_spectra' in changed_prop)
ei_spec = propman.ei_mon_spectra
self.assertEqual(ei_spec[0], 65542)
self.assertEqual(ei_spec[1], 5506)
def test_set_energy_bins_and_ei(self):
propman = self.prop_man
propman.incident_energy = 20
self.assertFalse(PropertyManager.incident_energy.multirep_mode())
propman.energy_bins = '-30,3,10'
bins = propman.energy_bins
self.assertAlmostEqual(bins[0], -30)
self.assertAlmostEqual(bins[1], 3)
self.assertAlmostEqual(bins[2], 10)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -30)
self.assertAlmostEqual(bins[1], 3)
self.assertAlmostEqual(bins[2], 10)
propman.incident_energy = 100.01
propman.energy_bins = [-20, 4, 100]
bins = propman.energy_bins
self.assertAlmostEqual(bins[0], -20)
self.assertAlmostEqual(bins[1], 4)
self.assertAlmostEqual(bins[2], 100)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -20)
self.assertAlmostEqual(bins[1], 4)
self.assertAlmostEqual(bins[2], 100)
propman.incident_energy = 10
self.assertAlmostEqual(propman.incident_energy, 10)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -20 * 9.9999 / 100)
self.assertAlmostEqual(bins[1], 4 * 9.9999 / 100)
self.assertAlmostEqual(bins[2], 9.9999)
ei = [20, 30]
propman.incident_energy = ei
got_ei = propman.incident_energy
for ind, en in enumerate(got_ei):
self.assertAlmostEqual(en, ei[ind])
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -20 * 20 * 0.99999 / 100)
self.assertAlmostEqual(bins[1], 4 * 20 * 0.99999 / 100)
self.assertAlmostEqual(bins[2], 20 * 0.99999)
# check string work properly
propman.incident_energy = '20'
self.assertFalse(PropertyManager.incident_energy.multirep_mode())
propman.energy_bins = [-2, 0.1, 0.8]
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -2)
self.assertAlmostEqual(bins[1], 0.1)
self.assertAlmostEqual(bins[2], 0.8)
propman.incident_energy = '[20]'
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -40)
self.assertAlmostEqual(bins[1], 0.1 * 20)
self.assertAlmostEqual(bins[2], 0.8 * 20)
#
propman.energy_bins = [-2, 0.1, 0.8]
bins = propman.energy_bins
self.assertAlmostEqual(bins[0], -2)
self.assertAlmostEqual(bins[1], 0.1)
self.assertAlmostEqual(bins[2], 0.8)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -20 * 2)
self.assertAlmostEqual(bins[1], 20 * 0.1)
self.assertAlmostEqual(bins[2], 20 * 0.8)
propman.incident_energy = '20,30'
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
got_ei = propman.incident_energy
for ind, en in enumerate(got_ei):
self.assertAlmostEqual(en, ei[ind])
propman.energy_bins = None
self.assertFalse(propman.energy_bins)
def test_multirep_ei_iterate_over(self):
propman = self.prop_man
propman.incident_energy = 20
propman.energy_bins = [-2, 0.1, 0.8]
self.assertFalse(PropertyManager.incident_energy.multirep_mode())
AllEn = PropertyManager.incident_energy.getAllEiList()
for ind, en in enumerate(AllEn):
PropertyManager.incident_energy.set_current_ind(ind)
cen = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en, cen)
self.assertAlmostEqual(en, 20)
bins = propman.energy_bins
self.assertAlmostEqual(bins[0], -2)
self.assertAlmostEqual(bins[1], 0.1)
self.assertAlmostEqual(bins[2], 0.8)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -2)
self.assertAlmostEqual(bins[1], 0.1)
self.assertAlmostEqual(bins[2], 0.8)
propman.incident_energy = [20]
propman.energy_bins = [-2, 0.1, 0.8]
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
AllEn = PropertyManager.incident_energy.getAllEiList()
for ind, en in enumerate(AllEn):
PropertyManager.incident_energy.set_current_ind(ind)
cen = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en, cen)
self.assertAlmostEqual(en, 20)
bins = propman.energy_bins
self.assertAlmostEqual(bins[0], -2)
self.assertAlmostEqual(bins[1], 0.1)
self.assertAlmostEqual(bins[2], 0.8)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -2 * 20)
self.assertAlmostEqual(bins[1], 0.1 * 20)
self.assertAlmostEqual(bins[2], 0.8 * 20)
eng = [20, 40, 60]
propman.incident_energy = eng
propman.energy_bins = [-2, 0.1, 0.8]
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
AllEn = PropertyManager.incident_energy.getAllEiList()
for ic, en in enumerate(AllEn):
PropertyManager.incident_energy.set_current_ind(ic)
self.assertAlmostEqual(en, eng[ic])
cen = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en, cen)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -2 * en)
self.assertAlmostEqual(bins[1], 0.1 * en)
self.assertAlmostEqual(bins[2], 0.8 * en)
#
AllEn = PropertyManager.incident_energy.getAllEiList()
for ic, en in enumerate(AllEn):
PropertyManager.incident_energy.set_current_ind(ic)
self.assertAlmostEqual(en, eng[ic])
ei_stored = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en, ei_stored)
cen = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en, cen)
bins = PropertyManager.energy_bins.get_abs_range(propman)
self.assertAlmostEqual(bins[0], -2 * eng[ic])
self.assertAlmostEqual(bins[1], 0.1 * eng[ic])
self.assertAlmostEqual(bins[2], 0.8 * eng[ic])
def test_incident_energy_custom_enum(self):
##### Custom enum works in a peculiar way
propman = self.prop_man
en_source = [20, 40, 80]
propman.incident_energy = en_source
propman.energy_bins = [-2, 0.1, 0.8]
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
AllEn = PropertyManager.incident_energy.getAllEiList()
for ic, en in enumerate(AllEn):
PropertyManager.incident_energy.set_current_ind(ic)
# propagate current energy value to incident energy class
self.assertAlmostEqual(en, en_source[ic])
en_internal = PropertyManager.incident_energy.get_current()
self.assertAlmostEqual(en_internal, en_source[ic])
def test_auto_ei(self):
propman = self.prop_man
propman.incident_energy = 'Auto'
propman.energy_bins = [-2, 0.1, 0.8]
self.assertTrue(PropertyManager.incident_energy.multirep_mode())
# create test workspace
wsEn = CreateSampleWorkspace(Function='Multiple Peaks', NumBanks=1, BankPixelWidth=2, NumEvents=10000,
XUnit='Energy', XMin=10, XMax=200, BinWidth=0.1)
# convert units to TOF to simulate real workspace obtained from experiment
mon_ws = ConvertUnits(InputWorkspace=wsEn, Target='TOF')
# find chopper log values would be present in real workspace
l_chop = 7.5 # chopper position build into test workspace
l_mon1 = 15. # monitor 1 position (detector 1), build into test workspace
t_mon1 = 3100. # the time of flight defined by incident energy of the peak generated by
# CreateSampelpWorkspace algorithm.
t_chop = (l_chop / l_mon1) * t_mon1
# Add these log values to simulated workspace to represent real sample logs
AddTimeSeriesLog(mon_ws, Name="fermi_delay", Time="2010-01-01T00:00:00", Value=t_chop, DeleteExisting=True)
AddTimeSeriesLog(mon_ws, Name="fermi_delay", Time="2010-01-01T00:30:00", Value=t_chop)
AddTimeSeriesLog(mon_ws, Name="fermi_speed", Time="2010-01-01T00:00:00", Value=900, DeleteExisting=True)
AddTimeSeriesLog(mon_ws, Name="fermi_speed", Time="2010-01-01T00:30:00", Value=900)
AddTimeSeriesLog(mon_ws, Name="is_running", Time="2010-01-01T00:00:00", Value=1, DeleteExisting=True)
AddTimeSeriesLog(mon_ws, Name="is_running", Time="2010-01-01T00:30:00", Value=1)
valid = PropertyManager.incident_energy.validate(propman, PropertyManager)
self.assertTrue(valid[0])
valid = PropertyManager.energy_bins.validate(propman, PropertyManager)
self.assertTrue(valid[0])
# define monitors, used to calculate ei
propman.ei_mon_spectra = (1, 2)
PropertyManager.incident_energy.set_auto_Ei(mon_ws, propman)
allEi = PropertyManager.incident_energy.getAllEiList()
self.assertAlmostEqual(allEi[0], 8.8, 1)
self.assertAlmostEqual(allEi[1], 15.8, 1)
def test_ignore_complex_defailts_changes_fom_instrument(self):
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=10)
SetInstrumentParameter(ws, ParameterName="bkgd_range", Value="bkgd-range-min:bkgd-range-max",
ParameterType="String")
SetInstrumentParameter(ws, ParameterName="bkgd-range-min", Value="100.", ParameterType="Number")
SetInstrumentParameter(ws, ParameterName="bkgd-range-max", Value="200.", ParameterType="Number")
propman = self.prop_man
propman.background_range = [20, 40]
bkgd_range = propman.bkgd_range
self.assertAlmostEqual(bkgd_range[0], 20)
self.assertAlmostEqual(bkgd_range[1], 40)
changed_prop = propman.update_defaults_from_instrument(ws.getInstrument())
self.assertEqual(len(changed_prop), 3)
bkgd_range = propman.bkgd_range
self.assertAlmostEqual(bkgd_range[0], 20)
self.assertAlmostEqual(bkgd_range[1], 40)
def test_ignore_complex_defailts_single_fom_instrument(self):
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=10)
SetInstrumentParameter(ws, ParameterName="bkgd_range", Value="bkgd-range-min:bkgd-range-max",
ParameterType="String")
SetInstrumentParameter(ws, ParameterName="bkgd-range-min", Value="100.", ParameterType="Number")
SetInstrumentParameter(ws, ParameterName="bkgd-range-max", Value="200.", ParameterType="Number")
propman = self.prop_man
mari_bkgd_range = propman.bkgd_range
setattr(propman, 'bkgd-range-max', 40)
bkgd_range = propman.bkgd_range
self.assertAlmostEqual(bkgd_range[0], mari_bkgd_range[0])
self.assertAlmostEqual(bkgd_range[1], 40)
changed_prop = propman.update_defaults_from_instrument(ws.getInstrument())
self.assertEqual(len(changed_prop), 2)
bkgd_range = propman.bkgd_range
self.assertAlmostEqual(bkgd_range[0], 100)
self.assertAlmostEqual(bkgd_range[1], 40)
def test_monovan_integration_range(self):
propman = self.prop_man
propman.incident_energy = 10
propman.monovan_lo_frac = -0.6
propman.monovan_hi_frac = 0.7
range = propman.abs_units_van_range
self.assertAlmostEqual(range[0], -6.)
self.assertAlmostEqual(range[1], 7.)
range = propman.monovan_integr_range
self.assertAlmostEqual(range[0], -6.)
self.assertAlmostEqual(range[1], 7.)
propman.monovan_lo_value = -10
propman.monovan_hi_value = 10
range = propman.abs_units_van_range
self.assertAlmostEqual(range[0], -6.)
self.assertAlmostEqual(range[1], 7.)
propman.abs_units_van_range = [-40, 40]
self.assertAlmostEqual(propman.monovan_lo_value, -40)
self.assertAlmostEqual(propman.monovan_hi_value, 40)
range = propman.monovan_integr_range
self.assertAlmostEqual(range[0], -40)
self.assertAlmostEqual(range[1], 40)
propman.abs_units_van_range = None
range = propman.monovan_integr_range
self.assertAlmostEqual(range[0], -6.)
self.assertAlmostEqual(range[1], 7.)
#
propman.monovan_lo_frac = -0.7
range = propman.monovan_integr_range
self.assertAlmostEqual(range[0], -7.)
def test_save_filename(self):
propman = self.prop_man
propman.incident_energy = 10
propman.sample_run = 0
propman.monovan_run = None
name = propman.save_file_name
self.assertEqual(name, 'MAR00000Ei10d00meV')
def test_log_to_Mantid(self):
propman = self.prop_man
self.assertFalse(propman.log_to_mantid)
propman.log_to_mantid = True
self.assertTrue(propman.log_to_mantid)
propman.log_to_mantid = 0
self.assertFalse(propman.log_to_mantid)
def test_hadmask_options(self):
propman = self.prop_man
propman.hard_mask_file = 'some_hard_mask_file'
self.assertEqual(propman.hard_mask_file, 'some_hard_mask_file.msk')
propman.use_hard_mask_only = False
self.assertFalse(propman.use_hard_mask_only)
propman.use_hard_mask_only = True
self.assertTrue(propman.use_hard_mask_only)
propman.hardmaskPlus = 'other_hard_mask_file.msk'
self.assertFalse(propman.use_hard_mask_only)
self.assertEqual(propman.hard_mask_file, 'other_hard_mask_file.msk')
self.assertTrue(propman.run_diagnostics)
propman.hardmaskOnly = 'more_hard_mask_file'
self.assertTrue(propman.use_hard_mask_only)
self.assertEqual(propman.hard_mask_file, 'more_hard_mask_file.msk')
self.assertTrue(propman.run_diagnostics)
propman.hardmaskOnly = 'None'
self.assertFalse(propman.use_hard_mask_only)
self.assertTrue(propman.run_diagnostics)
self.assertEqual(propman.hard_mask_file, None)
def test_hadmask_options_locked(self):
#
propman1 = self.prop_man
propman1.setChangedProperties()
propman1.hardmaskPlus = 'a_hard_mask_file'
self.assertFalse(propman1.use_hard_mask_only)
self.assertEqual(propman1.hard_mask_file, 'a_hard_mask_file.msk')
self.assertTrue(propman1.run_diagnostics)
changed_prop = propman1.getChangedProperties()
self.assertEqual(len(changed_prop), 2)
ws = CreateSampleWorkspace(NumBanks=1, BankPixelWidth=4, NumEvents=10)
SetInstrumentParameter(ws, ParameterName="hard_mask_file", Value="different", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="run_diagnostics", Value="False", ParameterType="String")
SetInstrumentParameter(ws, ParameterName="use_hard_mask_only", Value="True", ParameterType="String")
# verify if changed properties list does not change anything
changed_prop = propman1.update_defaults_from_instrument(ws.getInstrument())
self.assertEqual(len(changed_prop), 2)
self.assertFalse(propman1.use_hard_mask_only)
self.assertEqual(propman1.hard_mask_file, 'a_hard_mask_file.msk')
self.assertTrue(propman1.run_diagnostics)
propman1.setChangedProperties(set())
propman1.hardmaskOnly = 'more_hard_mask_file'
# verify if changed properties list does not change anything
changed_prop = propman1.update_defaults_from_instrument(ws.getInstrument())
self.assertTrue(propman1.use_hard_mask_only)
self.assertEqual(propman1.hard_mask_file, 'more_hard_mask_file.msk')
self.assertTrue(propman1.run_diagnostics)
def test_sum_runs(self):
propman = self.prop_man
propman.sum_runs = True
self.assertTrue(propman.sum_runs)
propman.sum_runs = False
self.assertFalse(propman.sum_runs)
propman.sum_runs = 10 # TODO should we define number of runs to sum?
self.assertTrue(propman.sum_runs)
propman.sum_runs = 0
self.assertFalse(propman.sum_runs)
# def test_do_white(self) :
# tReducer = self.reducer
# monovan = 1000
# data = None
# name = tReducer.make_ckpt_name('do_white',monovan,data,'t1')
# self.assertEqual('do_white1000t1',name)
def test_monitors_list(self):
propman = self.prop_man
mons = propman.get_used_monitors_list()
self.assertEqual(len(mons), 3)
propman.normalise_method = None
mons = propman.get_used_monitors_list()
self.assertEqual(len(mons), 2)
propman.normalise_method = 'monitor-2'
mons = propman.get_used_monitors_list()
self.assertEqual(len(mons), 2)
def test_mon2_integration_range(self):
propman = self.prop_man
propman.incident_energy = 10
range = propman.mon2_norm_energy_range
# check defaults
self.assertAlmostEqual(range[0], 8.)
self.assertAlmostEqual(range[1], 12.)
propman.mon2_norm_energy_range = [0.7, 1.3]
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 7.)
self.assertAlmostEqual(range[1], 13.)
propman.mon2_norm_energy_range = '[0.5,1.5]'
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 5.)
self.assertAlmostEqual(range[1], 15.)
propman.mon2_norm_energy_range = '0.6,1.4'
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 6.)
self.assertAlmostEqual(range[1], 14.)
self.assertRaises(KeyError, setattr, propman, 'mon2_norm_energy_range', 10)
self.assertRaises(KeyError, setattr, propman, 'mon2_norm_energy_range', '[0.95,1.05,4]')
self.assertRaises(KeyError, setattr, propman, 'mon2_norm_energy_range', '[0.05,0.9]')
propman.mon2_norm_energy_range = '0.95,1.05'
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 9.5)
self.assertAlmostEqual(range[1], 10.5)
# Test multirep mode
propman.incident_energy = [10, 20, 30]
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 9.5)
self.assertAlmostEqual(range[1], 10.5)
PropertyManager.incident_energy.next()
range = propman.mon2_norm_energy_range
self.assertAlmostEqual(range[0], 2 * 9.5)
self.assertAlmostEqual(range[1], 2 * 10.5)
PropertyManager.incident_energy.next()
range = propman.mon2_norm_energy_range