eDNA Visualizations

Scripts for summarizing, running statistics on, and generating graphics for metabarcoding and shotgun metagenomic sequence data sets.

Name		Name	Last commit message	Last commit date
Latest commit History 14 Commits
.ipynb_checkpoints		.ipynb_checkpoints
MAG_relativeabundances		MAG_relativeabundances
.DS_Store		.DS_Store
README.md		README.md
alpha_rarefaction_curves_from_qiime2_output.ipynb		alpha_rarefaction_curves_from_qiime2_output.ipynb
amplicon_wrangling.ipynb		amplicon_wrangling.ipynb
compare_taxa_shotgun_vs_amplicons_quantitative.ipynb		compare_taxa_shotgun_vs_amplicons_quantitative.ipynb
comparing_observed_taxa_stackedbars.ipynb		comparing_observed_taxa_stackedbars.ipynb
exploding_donuts_for_mgn_fractions.ipynb		exploding_donuts_for_mgn_fractions.ipynb
format_MEBS_for_heatmap.ipynb		format_MEBS_for_heatmap.ipynb
format_coverm_relabund_for_heatmap.ipynb		format_coverm_relabund_for_heatmap.ipynb
merge_sample_ASV_counts.ipynb		merge_sample_ASV_counts.ipynb

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