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vcf_to_sparse.py location for compound het detection #103

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Naughtoncolin opened this issue Jun 11, 2024 · 0 comments
Open

vcf_to_sparse.py location for compound het detection #103

Naughtoncolin opened this issue Jun 11, 2024 · 0 comments

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@Naughtoncolin
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I see in the script "DetermineCH.py" that a sparse VCF is required. I also see a reference to "vcf_to_sparse.py" in the arg parse portion of the script. Where can I find this script to convert a vcf to a svcf that is compatible with "DetermineCH.py"?

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