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Correction to: A systematic evaluation of the computational tools for lncRNA identification

DOI: 10.1093/bib/bbab285

The BASiNET package documentation available on CRAN has a vignette and a file with the documentation for each function explaining the correct way to execute the method, available at: CRAN BASiNET

Execution

library("BASiNET")
mRNA <- "gencode.v32.pc_transcripts.fa"
lncRNA <- "gencode.v32.lncRNA_transcripts.fa"
res <- classification(mRNA,lncRNA,save="HA1.dat")

The "save" option was used only for the purpose of saving the model and feature matrix extracted from this database.

Folders

  • datasets: contains the HA1 dataset
  • execution_logs: contains the execution log for the HA1 dataset
  • feature_matrices: contains the feature matrix obtained in HA1 dataset
  • models: contains the model obtained in HA1 dataset training step
  • scripts: contains the R script executed in HA1 dataset