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post-processing tool #47

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matsen opened this issue Oct 29, 2012 · 0 comments
Closed

post-processing tool #47

matsen opened this issue Oct 29, 2012 · 0 comments

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@matsen
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matsen commented Oct 29, 2012

Now that we have serialization down, it will be great to have a post-processing tool.

Two things that will be fun to see:

  • average per-generation survival (equivalent to acceptance prob for MH)
  • expected MRCA depth (somewhat eqivalent to MCMC autocorrelation function)

For some reason I also think that the average lifetime of a particle would be neat. Note that it's susceptible to edge effects when the generations run out.

We also need a name. @koadman, any clever suggestions?

@ghost ghost assigned habnabit Oct 29, 2012
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