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commonCoordinateSpaceVersion.rst

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CommonCoordinateSpaceVersion

Semantic name

https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion

Display as

Common coordinate space version

For this schema openMINDS provides a library of instances.



Properties

Required

accessibility, anatomicalAxesOrientation, axesOrigin, fullDocumentation, nativeUnit, releaseDate, shortName, versionIdentifier, versionInnovation

Optional

abbreviation, author, copyright, custodian, defaultImage, description, digitalIdentifier, fullName, funding, homepage, howToCite, isAlternativeVersionOf, isNewVersionOf, keyword, license, ontologyIdentifier, otherContribution, relatedPublication, repository, supportChannel, usedSpecimen


abbreviation

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/abbreviation

value type
string
formatting: text/plain; singleline
instructions

Enter the official abbreviation of this common coordinate space version.

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accessibility

Level to which something is accessible to someone or something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/accessibility

value type
linked object of type
ProductAccessibility
instructions

Add the accessibility of the data for this research product version.

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anatomicalAxesOrientation

Relation between reference planes used in anatomy and mathematics.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/anatomicalAxesOrientation

value type
linked object of type
AnatomicalAxesOrientation
instructions

Add the axes orientation denoted in standard anatomical terms of direction (stated as XYZ) for this common coordinate space version.

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author

Creator of a literary or creative work, as well as a dataset publication.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/author

value type
linked object array (1-N) of type
Consortium, Organization or Person
instructions

Add all parties that contributed to this common coordinate space version as authors. Note that these authors will overwrite the author list provided for the overarching common coordinate space.

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axesOrigin

Special point in a coordinate system used as a fixed point of reference for the geometry of the surrounding space.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/axesOrigin

value type
embedded object array (2-3) of type
QuantitativeValue
instructions

Enter the origin (central point where all axes intersect) of this common coordinate space version for two-dimensional spaces as [x, y] or for three-dimensional space as [x, y, z].

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Exclusive and assignable legal right of an originator to reproduce, publish, sell, or distribute the matter and form of a creative work for a defined time period.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/copyright

value type
embedded object of type
Copyright
instructions

Enter the copyright information of this research product version.

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custodian

The 'custodian' is a legal person who is responsible for the content and quality of the data, metadata, and/or code of a research product.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/custodian

value type
linked object array (1-N) of type
Consortium, Organization or Person
instructions

Add all parties that fulfill the role of a custodian for the research product version (e.g., a research group leader or principle investigator). Custodians are typically the main contact in case of misconduct, obtain permission from the contributors to publish personal information, and maintain the content and quality of the data, metadata, and/or code of the research product version.

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defaultImage

Two or three dimensional image that particluarly represents a specific coordinate space.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/defaultImage

value type
linked object array (1-N) of type
File
instructions

Add all image files used as visual representation of this common coordinate space version.

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description

Longer statement or account giving the characteristics of someone or something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/description

value type
string
formatting: text/markdown; multiline
instructions

Enter a description (or abstract) of this research product version. Note that this version specific description will overwrite the description for the overarching dataset.

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digitalIdentifier

Digital handle to identify objects or legal persons.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/digitalIdentifier

value type
linked object of type
DOI, ISBN or RRID
instructions

Add the globally unique and persistent digital identifier of this research product version.

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fullDocumentation

Non-abridged instructions, comments, and information for using a particular product.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/fullDocumentation

value type
linked object of type
DOI, File or WebResource
instructions

Add the publication or file that acts as the full documentation of this research product version.

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fullName

Whole, non-abbreviated name of something or somebody.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/fullName

value type
string
formatting: text/plain; singleline
instructions

Enter a descriptive full name (or title) for this research product version. Note that this version specific full name will overwrite the full name for the overarching dataset.

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funding

Money provided by a legal person for a particular purpose.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/funding

value type
linked object array (1-N) of type
Funding
instructions

Add all funding information of this research product version.

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homepage

Main website of something or someone.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/homepage

value type
string
formatting: text/plain; singleline
instructions

Enter the internationalized resource identifier (IRI) to the homepage of this research product version.

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howToCite

Preferred format for citing a particular object or legal person.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/howToCite

value type
string
formatting: text/markdown; multiline
instructions

Enter the preferred citation text for this research product version. Leave blank if citation text can be extracted from the assigned digital identifier.

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isAlternativeVersionOf

Reference to an original form where the essence was preserved, but presented in an alternative form.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/isAlternativeVersionOf

value type
linked object array (1-N) of type
CommonCoordinateSpaceVersion
instructions

Add all common coordinate space versions that can be used alternatively to this common coordinate space version.

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isNewVersionOf

Reference to a previous (potentially outdated) particular form of something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/isNewVersionOf

value type
linked object of type
CommonCoordinateSpaceVersion
instructions

Add the common coordinate space version preceding this common coordinate space version.

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keyword

Significant word or concept that are representative of something or someone.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/keyword

value type
linked object array (1-N) of type
ActionStatusType, AgeCategory, AnalysisTechnique, AnatomicalAxesOrientation, AnatomicalIdentificationType, AnatomicalPlane, AnnotationCriteriaType, AnnotationType, AtlasType, AuditoryStimulusType, BiologicalOrder, BiologicalProcess, BiologicalSex, BreedingType, CellCultureType, CellType, ChemicalMixtureType, Colormap, ContributionType, CranialWindowConstructionType, CranialWindowReinforcementType, CriteriaQualityType, DataType, DeviceType, DifferenceMeasure, Disease, DiseaseModel, EducationalLevel, ElectricalStimulusType, EthicsAssessment, ExperimentalApproach, FileBundleGrouping, FileRepositoryType, FileUsageRole, GeneticStrainType, GustatoryStimulusType, Handedness, Language, Laterality, LearningResourceType, MeasuredQuantity, MeasuredSignalType, MetaDataModelType, ModelAbstractionLevel, ModelScope, MolecularEntity, OlfactoryStimulusType, OperatingDevice, OperatingSystem, OpticalStimulusType, Organ, OrganismSubstance, OrganismSystem, PatchClampVariation, PreparationType, ProductAccessibility, ProgrammingLanguage, QualitativeOverlap, SemanticDataType, Service, SetupType, SoftwareApplicationCategory, SoftwareFeature, Species, StimulationApproach, StimulationTechnique, SubcellularEntity, SubjectAttribute, TactileStimulusType, Technique, TermSuggestion, Terminology, TissueSampleAttribute, TissueSampleType, TypeOfUncertainty, UBERONParcellation, UnitOfMeasurement or VisualStimulusType
instructions

Add all relevant keywords to this research product version either by adding controlled terms or by suggesting new terms.

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license

Grant by a party to another party as an element of an agreement between those parties that permits to do, use, or own something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/license

value type
linked object of type
License
instructions

Add the license of this common coordinate space version.

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nativeUnit

Determinate quantity used in the original measurement.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/nativeUnit

value type
linked object of type
UnitOfMeasurement
instructions

Add the native unit that is used for this common coordinate space version.

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ontologyIdentifier

Term or code used to identify something or someone registered within a particular ontology.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/ontologyIdentifier

value type
string array (1-N)
formatting: text/plain; singleline
instructions

Enter the internationalized resource identifiers (IRIs) to the related ontological terms matching this common coordinate space version.

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otherContribution

Giving or supplying of something (such as money or time) as a part or share other than what is covered elsewhere.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/otherContribution

value type
embedded object array (1-N) of type
Contribution
instructions

Add any other contributions to this research product version that are not covered under 'author'/'developer' or 'custodian'.

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relatedPublication

Reference to something that was made available for the general public to see or buy.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/relatedPublication

value type
linked object array (1-N) of type
DOI, HANDLE, ISBN, ISSN, Book, Chapter or ScholarlyArticle
instructions

Add all further publications besides the full documentation that provide the original context for the production of this research product version (e.g., an original research article that used or produced the data of this research product version).

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releaseDate

Fixed date on which a product is due to become or was made available for the general public to see or buy

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/releaseDate

value type
string
formatting: text/plain; singleline
instructions

Enter the date (actual or intended) on which this research product version was first release, formatted as 'YYYY-MM-DD'.

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repository

Place, room, or container where something is deposited or stored.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/repository

value type
linked object of type
FileRepository
instructions

Add the file repository of this research product version.

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shortName

Shortened or fully abbreviated name of something or somebody.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/shortName

value type
string
formatting: text/plain; singleline
instructions

Enter a short name (or alias) for this research product version that could be used as a shortened display title (e.g., for web services with too little space to display the full name).

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supportChannel

Way of communication used to interact with users or customers.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/supportChannel

value type
string array (1-N)
formatting: text/plain; singleline
instructions

Enter all channels through which a user can receive support for handling this research product version.

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usedSpecimen

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/usedSpecimen

value type
linked object array (1-N) of type
Subject, SubjectGroup, TissueSample or TissueSampleCollection
instructions

Add the specimen that was used for the creation of this common coordinate space version.

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versionIdentifier

Term or code used to identify the version of something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/versionIdentifier

value type
string
formatting: text/plain; singleline
instructions

Enter the version identifier of this research product version.

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versionInnovation

Documentation on what changed in comparison to a previously published form of something.

schema_specifications

semantic name

https://openminds.ebrains.eu/vocab/versionInnovation

value type
string
formatting: text/markdown; multiline
instructions

Enter a short description (or summary) of the novelties/peculiarities of this research product version in comparison to its preceding versions. If this research product version is the first version, you can enter the following disclaimer 'This is the first version of this research product'.

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