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0.10.0.md

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Release notes for cobrapy 0.10.0

Fixes

  • The solvers packaged with cobrapy have been removed.
  • cobra is now a pure Python package and no longer has compiled extensions.
  • Massively simplified continuous testing and deployment.
  • The solver argument and configuration keyword arguments have been removed. Please set the solver on the model and configure it before calling optimization functions.
  • The deprecated ArrayBasedModel has been removed. Please use the function create_stoichiometric_matrix instead.
  • scipy is no longer required for MOMA based methods.
  • A few deprecated functions have been removed.
  • Test cases have been adjusted.
  • Small adjustments to loopless FVA.
  • The deletion study interface and functions were improved and now use the optlang interface.