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cellmlfileruntime.h
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/
cellmlfileruntime.h
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/*******************************************************************************
Copyright (C) The University of Auckland
OpenCOR is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenCOR is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <https://gnu.org/licenses>.
*******************************************************************************/
//==============================================================================
// CellML file runtime
//==============================================================================
#pragma once
//==============================================================================
#include "cellmlfileissue.h"
#include "cellmlsupportglobal.h"
//==============================================================================
#include <QIcon>
#include <QList>
#include <QMap>
#ifdef Q_OS_WIN
#include <QSet>
#include <QVector>
#endif
//==============================================================================
#include "cellmlapibegin.h"
#include "cellml-api-cxx-support.hpp"
#include "IfaceCCGS.hxx"
#include "IfaceCellML_APISPEC.hxx"
#include "cellmlapiend.h"
//==============================================================================
namespace OpenCOR {
//==============================================================================
namespace Compiler {
class CompilerEngine;
} // namespace Compiler
//==============================================================================
namespace CellMLSupport {
//==============================================================================
class CellmlFile;
//==============================================================================
class CELLMLSUPPORT_EXPORT CellmlFileRuntimeParameter
{
public:
enum class Type {
Unknown,
Voi,
State,
Rate,
Constant,
ComputedConstant,
Algebraic,
Floating,
LocallyBound,
Data
};
explicit CellmlFileRuntimeParameter(const QString &pName, int pDegree,
const QString &pUnit,
const QStringList &pComponentHierarchy,
Type pType, int pIndex,
double *pData = nullptr);
static bool compare(CellmlFileRuntimeParameter *pParameter1,
CellmlFileRuntimeParameter *pParameter2);
QString name() const;
int degree() const;
QString unit() const;
QStringList componentHierarchy() const;
Type type() const;
int index() const;
double * data() const;
QString formattedName() const;
QString formattedComponentHierarchy() const;
QString fullyFormattedName() const;
QString formattedUnit(const QString &pVoiUnit) const;
static QMap<int, QIcon> icons();
static QIcon icon(Type pParameterType);
private:
QString mName;
int mDegree;
QString mUnit;
QStringList mComponentHierarchy;
Type mType;
int mIndex;
double *mData;
};
//==============================================================================
using CellmlFileRuntimeParameters = QList<CellmlFileRuntimeParameter *>;
//==============================================================================
class CELLMLSUPPORT_EXPORT CellmlFileRuntime : public QObject
{
Q_OBJECT
public:
using InitializeConstantsFunction = void (*)(double *CONSTANTS, double *RATES, double *STATES);
using ComputeComputedConstantsFunction = void (*)(double VOI, double *CONSTANTS, double *RATES, double *STATES, double *ALGEBRAIC);
using ComputeVariablesFunction = void (*)(double VOI, double *CONSTANTS, double *RATES, double *STATES, double *ALGEBRAIC);
using ComputeRatesFunction = void (*)(double VOI, double *CONSTANTS, double *RATES, double *STATES, double *ALGEBRAIC);
explicit CellmlFileRuntime(CellmlFile *pCellmlFile);
~CellmlFileRuntime() override;
void update(CellmlFile *pCellmlFile, bool pAll = true);
bool isValid() const;
bool needNlaSolver() const;
void importData(const QString &pName,
const QStringList &pComponentHierarchy, int pIndex,
double *pData);
int constantsCount() const;
int statesCount() const;
int ratesCount() const;
int algebraicCount() const;
InitializeConstantsFunction initializeConstants() const;
ComputeComputedConstantsFunction computeComputedConstants() const;
ComputeVariablesFunction computeVariables() const;
ComputeRatesFunction computeRates() const;
CellmlFileIssues issues() const;
CellmlFileRuntimeParameters parameters() const;
CellmlFileRuntimeParameters dataParameters(const double *pData = nullptr) const;
CellmlFileRuntimeParameter * voi() const;
private:
bool mAtLeastOneNlaSystem = false;
ObjRef<iface::cellml_services::CodeInformation> mCodeInformation = nullptr;
int mConstantsCount = 0;
int mStatesRatesCount = 0;
int mAlgebraicCount = 0;
Compiler::CompilerEngine *mCompilerEngine = nullptr;
CellmlFileIssues mIssues;
CellmlFileRuntimeParameter *mVoi = nullptr;
CellmlFileRuntimeParameters mParameters;
InitializeConstantsFunction mInitializeConstants = nullptr;
ComputeComputedConstantsFunction mComputeComputedConstants = nullptr;
ComputeVariablesFunction mComputeVariables = nullptr;
ComputeRatesFunction mComputeRates = nullptr;
void resetCodeInformation();
void resetFunctions();
void reset(bool pRecreateCompilerEngine, bool pResetIssues, bool pResetAll);
void couldNotGenerateModelCodeIssue(const QString &pExtraInfo);
void unknownProblemDuringModelCodeGenerationIssue();
void checkCodeInformation(iface::cellml_services::CodeInformation *pCodeInformation);
void retrieveCodeInformation(iface::cellml_api::Model *pModel);
QString cleanCode(const std::wstring &pCode);
QString methodCode(const QString &pCodeSignature, const QString &pCodeBody);
QString methodCode(const QString &pCodeSignature,
const std::wstring &pCodeBody);
QStringList componentHierarchy(iface::cellml_api::CellMLElement *pElement);
};
//==============================================================================
} // namespace CellMLSupport
} // namespace OpenCOR
//==============================================================================
// End of file
//==============================================================================